KEGG   Leclercia sp. LSNIH1: C2U54_08135
Entry
C2U54_08135       CDS       T05297                                 
Name
(GenBank) DNA polymerase III subunit psi
  KO
K02344  DNA polymerase III subunit psi [EC:2.7.7.7]
Organism
lei  Leclercia sp. LSNIH1
Pathway
lei03030  DNA replication
lei03430  Mismatch repair
lei03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lei00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    C2U54_08135
   03430 Mismatch repair
    C2U54_08135
   03440 Homologous recombination
    C2U54_08135
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lei03032]
    C2U54_08135
   03400 DNA repair and recombination proteins [BR:lei03400]
    C2U54_08135
Enzymes [BR:lei01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     C2U54_08135
DNA replication proteins [BR:lei03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     C2U54_08135
DNA repair and recombination proteins [BR:lei03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     C2U54_08135
SSDB
Motif
Pfam: DNA_III_psi CSTF_C
Other DBs
NCBI-ProteinID: AUU83977
Position
1614634..1615047
AA seq 137 aa
MASRRDRQLQQLGITQWALRRPAALQGEIAISLPAHIRLVMVAQSLPALSEPVIADVLRA
LRLGADQVLQLTPDRVAMLPEGSRCNSWQLGVREEIALEGASMASPALDELNVNPAARRA
LWQQICEHEHNFFPHDD
NT seq 414 nt   +upstreamnt  +downstreamnt
atggcatcccgacgagacaggcaactacagcaactgggcatcacccagtgggcgctgcgc
cgcccggcggcattgcagggcgaaatcgccatctcgctaccggcgcatattcgtctggtg
atggtggcgcaaagcctgcccgccctgagcgagccggtgatcgccgacgtacttcgggcg
ctgaggctgggtgccgatcaggtgctacaactgacgcccgatcgcgtggccatgctgccc
gagggcagccgctgcaacagctggcagcttggcgtaagagaagagattgctctggagggg
gcgagtatggcctctccggcgctggacgaacttaacgtaaacccggcggcacgtcgcgcg
ctgtggcaacaaatctgcgaacatgaacacaatttcttccctcacgacgactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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