KEGG   Limosilactobacillus fermentum F-6: LBFF_1638
Entry
LBFF_1638         CDS       T02669                                 
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
lff  Limosilactobacillus fermentum F-6
Brite
KEGG Orthology (KO) [BR:lff00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lff03016]
    LBFF_1638 (truA)
Enzymes [BR:lff01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     LBFF_1638 (truA)
Transfer RNA biogenesis [BR:lff03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    LBFF_1638 (truA)
 Prokaryotic type
    LBFF_1638 (truA)
SSDB
Motif
Pfam: PseudoU_synth_1 DevR
Other DBs
NCBI-ProteinID: AGL89528
UniProt: A0A806J0X6
Position
complement(1653843..1654619)
AA seq 258 aa
MHRYKITFAYDGSNFAGFQVQPGERTVQQVLERAVNKIAKKPQPPLMVFGSGRTDAGVHA
LGQVAHFDLPYQIPGPSLVRALNSSLPLDVLVKEATEVAPDFHARFDAHHKRYRYRVVGG
EFTNPFKRNYTGHYKYPVDVERMQTAAQDFVGEHDFTSFVASGSQATSNVRRIDEVTVVR
DEENDEVVFDFVGNGFLYNQVRIMVAFLLEIGNGRRPVDDVMRVMKAKNRDLARGTAPAS
GLYLVEVTYDSPANSQND
NT seq 777 nt   +upstreamnt  +downstreamnt
gtgcaccgttataagataacctttgcctacgacggcagtaactttgctggctttcaggtt
cagcccggtgagcgaaccgttcagcaggtcctcgaacgggccgttaataagatcgctaaa
aaaccacaaccgccgctaatggtcttcggttccggacgtaccgacgctggcgttcacgcc
ctcggtcaggtcgcccacttcgacttaccataccaaattccggggccgtccttggtgcgg
gccctgaattcaagcctccccctcgacgtcttggtgaaggaggcaacagaagtggcgccg
gactttcacgcccgctttgatgcccaccataagcgctaccgctaccgggtggtggggggt
gagttcaccaacccctttaagcgtaattacaccggccattacaagtacccggtcgacgtt
gaacggatgcaaacagcggcccaggacttcgttggtgaacacgacttcacctcctttgtt
gcctctgggtcgcaagcgaccagcaacgttcgccgcatcgatgaggtaaccgtggttcgg
gatgaagaaaacgacgaggtggtctttgacttcgttggtaatggttttttgtataaccag
gtccggattatggtggccttcttactggagattggtaacggccgccgccccgtcgatgac
gttatgcgggtaatgaaggccaagaaccgcgatctcgcccggggaacggcgccggccagt
ggcttatacctggtggaagtgacctatgattccccggcgaattcacaaaatgattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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