KEGG   Lysinibacillus fusiformis: HR49_17930
Entry
HR49_17930        CDS       T03655                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
lfu  Lysinibacillus fusiformis
Pathway
lfu02024  Quorum sensing
lfu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lfu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HR49_17930
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HR49_17930
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lfu03019]
    HR49_17930
   03036 Chromosome and associated proteins [BR:lfu03036]
    HR49_17930
Messenger RNA biogenesis [BR:lfu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     HR49_17930
Chromosome and associated proteins [BR:lfu03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    HR49_17930
SSDB
Motif
Pfam: Hfq LSM DNA_pol3_delta
Other DBs
NCBI-ProteinID: AJK88878
UniProt: A0A1H9CTV2
Position
complement(3600366..3600596)
AA seq 76 aa
MKSINLQDTFLNQLRKNSVFVTVFLLNGFQLKGTVKSYDNFTVLLLDAENKQHLIYKHAI
STFVPAKQIEFLETEA
NT seq 231 nt   +upstreamnt  +downstreamnt
atgaaatcaatcaacttgcaagatacgttcttgaaccaactacgtaaaaacagtgttttt
gtaactgtatttctattaaacggatttcagttaaaagggactgtgaaatcatatgataat
tttacagttttattattggatgctgaaaataagcagcacctgatttacaagcacgccatt
tctacattcgttccagctaaacaaatagaatttttagagacagaagcataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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