KEGG   Lottia gigantea (owl limpet): LOTGIDRAFT_144742
Entry
LOTGIDRAFT_144742 CDS       T03273                                 
Name
(RefSeq) hypothetical protein
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
lgi  Lottia gigantea (owl limpet)
Brite
KEGG Orthology (KO) [BR:lgi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lgi03016]
    LOTGIDRAFT_144742
Enzymes [BR:lgi01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     LOTGIDRAFT_144742
Transfer RNA biogenesis [BR:lgi03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    LOTGIDRAFT_144742
SSDB
Motif
Pfam: Dus zf-CCCH_4 zf_CCCH_4 zf-CCCH
Other DBs
NCBI-GeneID: 20234868
NCBI-ProteinID: XP_009054089
JGI: 144742
UniProt: V4C174
Position
Unknown
AA seq 597 aa
FSRYLVLDHKPQIDKEYLSEAVKNKIENTEANVVPDNSQNTSNDGQEPPAKKIRLKGRNK
HRPIEKRPDDADKLCPAIRQERECSFAGKCKFSHDLKAFFESKPADLGSSCYLYETFGKC
PYGLTCRYGAKHIDQNYKSIVNKELWEKNSHQLENLNYLSKDVQKLLWKKKYDFNKANTI
HKQVVDILEKRKKVKESKRNSNSSKNSEDSKEDETSSDIVTDEAVPTLGCVSDEDFIKLR
PKEVKLIDFSNKLYLAPLTTVGNLPFRRICKEYGVDITCGEMALSTNLLQGQQSEWALLR
RHPSEDIFGVQICGGFPDTMTRCAQLLQEQTTVDFIDINCGCPIDMIYKKGEGCALMSRN
YKFEQIIRSMVSVLNIPLTVKMRTGVWSYKNIAHELTPKLRDWGVSMVTLHGRSREQRYT
RLAAWDYIETCCNGAKPMPFFGNGDVLSYEDYNNYKKRSGVDGIMIARGALIKPWIFKEI
KDEQHWDISASERLEMLQRFCNYGLSHWGSDQQGVDTVRRFLLEWLSFLHRYIPVGILEH
PPQKINERPPYYKGRNELETLLSSANCGDWVKISEMLLGPVKPDFKFLPKHKANAYQ
NT seq 1794 nt   +upstreamnt  +downstreamnt
ttttctagatatctagttcttgaccacaaaccacagatagacaaagagtacctgtcagag
gcagtcaaaaataaaatagaaaacacagaagctaatgttgtaccagacaactctcaaaat
acctccaatgacggacaggaaccgcctgccaagaaaattcggttgaaaggtagaaacaaa
catagaccaattgagaaacgacctgatgatgctgataaactatgtccagccatacgacaa
gaaagagagtgctcattcgcaggaaaatgtaaattctctcatgatctcaaagcattcttt
gagtccaagcctgcagatcttggatcttcttgttacctgtatgaaacatttggaaaatgt
ccttatggcttgacatgtcgttatggtgctaaacatatagatcaaaattataaaagcatt
gttaataaagaactttgggaaaagaattctcatcagttagaaaatttaaattatttatcg
aaggatgttcaaaaactgttatggaaaaagaaatatgattttaacaaagcgaacaccatc
cacaagcaagttgtagatattttggagaaaaggaaaaaggtgaaagaaagtaagaggaat
tcaaattctagtaaaaattctgaagactctaaagaagatgagacttcatcagatatagtg
acagatgaagctgttccaactcttggatgtgtttctgatgaagatttcatcaaacttaga
ccaaaagaagtgaaactgatagatttttctaataaattgtatttggcaccactgacaaca
gtgggtaatttaccattcagaagaatctgtaaagaatatggagttgatattacttgtgga
gaaatggcattatctaccaatctgttacaaggacaacaatctgagtgggccttattacgt
cgtcatccatctgaggatatatttggagtacagatatgtgggggatttcctgatactatg
acaagatgtgctcagttattacaagaacagacaactgtagattttatagatattaactgt
ggttgtcctattgatatgatctataaaaagggtgaaggatgtgcactgatgtctagaaat
tataagtttgaacagattattagaagtatggtgtcagtattaaatataccattaactgtt
aaaatgagaactggtgtttggtcctacaaaaatatagctcatgagctaacacccaaatta
cgagattggggtgtttccatggttacgttacatggtagatctagagaacagcgctacaca
cgcctggcagcatgggattatatagaaacatgttgtaatggagctaaaccaatgcccttc
tttggaaatggagatgtgttatcatatgaagattataataactataagaaacgatcagga
gtagatggtatcatgatagctaggggggctttaataaaaccctggatatttaaagaaatc
aaagatgaacagcactgggatatctcagcttctgaaagattggaaatgttacagagattc
tgtaactatggtttaagtcattggggttctgatcaacaaggtgtggatactgttagaaga
tttcttttagaatggttatcattcttacatagatacataccagttggaatattagaacac
ccaccacagaagatcaatgaaagaccaccatattataaaggtagaaatgaactggagaca
ttattatcaagtgctaactgtggggactgggtcaaaataagtgagatgttattaggtcct
gtaaaaccagattttaaatttctaccaaaacataaagctaatgcataccagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (101)   
   KEGG ORTHOLOGY (1)   
   RefGene (96)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (113)   

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