KEGG   Lottia gigantea (owl limpet): LOTGIDRAFT_198942
Entry
LOTGIDRAFT_198942 CDS       T03273                                 
Name
(RefSeq) hypothetical protein
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
lgi  Lottia gigantea (owl limpet)
Brite
KEGG Orthology (KO) [BR:lgi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lgi04121]
    LOTGIDRAFT_198942
   03400 DNA repair and recombination proteins [BR:lgi03400]
    LOTGIDRAFT_198942
Enzymes [BR:lgi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     LOTGIDRAFT_198942
Ubiquitin system [BR:lgi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    LOTGIDRAFT_198942
DNA repair and recombination proteins [BR:lgi03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    LOTGIDRAFT_198942
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN zf-C3HC4 zf-RING_2 zf-C3HC4_2 zf-C3HC4_3 zf-RING_UBOX zf-C3HC4_4 zf-RING_5 DEAD zf-Nse Prok-RING_4 zf-ANAPC11 zf-rbx1 zf-RING_6 zf-RING_4 LbR_Ice_bind
Other DBs
NCBI-GeneID: 20245327
NCBI-ProteinID: XP_009045586
JGI: 198942
UniProt: V4AI27
Position
Unknown
AA seq 917 aa
MFGSILGVVRIQHFKGRVEAKEKLMLKRDDEYYKNAIQVVNMDSEQVGHIKRDLAETLTF
ILDNKLARLEGVAVMGYLYKHAMRLEITLWGDLEKKEEAFSVLRSRGFTPKENSGETSSS
QASSSHLSGCQESGHQVKTEMDKLFDSLEEGGKTAMAEPTQAIRTPLYPHQKQALNWMIC
KENNEALPPFWEKGGHRYYNSLTGYTTSHRPSTVHGGILADDMGLGKTLEVISLILTNFH
DGQPLATPDVSQKHLSQHKVVTDNSKVVTDNSKVATDNSKVVTDNSKVVTDNSKVATNNG
QVQTVADVLLDFLKPDSSNDFEVKSNEHEVKSLDPKSNDCEFKLKNKSEKKMLTDSDKNS
NSAPCIDLTSQGAKHSDMVATDNGQVQTVADVFTTDKPRTTLIICPLSVIYNWQCQLEEH
VREDVKLKIYKFHGSHRTTDSKLLESQDVVISTYGTITAEFKGGNRLRKIHWLRIILDEG
HEIRNPDTLRALAITELKAERKWVITGTPIQNNLRDLYSLVNFLDISPLNQLSLWRKTIE
RPIFHGDESAITRVRALVANIGLRRTKNQQVNGKPLVELPARNVFIEKIKFSEEERQVYN
DMETHGKRIIKGNGNHGLPDLRPYCHVTINMDGGDQPQDDTTDLIDDETKQKLIDDLLAV
LNSGSDEECSICLDSLKHPVITLCAHVYCRTCIENVIQQNNTMTTACPMCREEIKLGFWF
GVPEKQQPEIPVITDENWQSSSKVDALMKALVQQRIDDPTVKSIIVSQFTSLLTLIEVPL
RLNGFKFARLDGKMTNKKRVDNMEMFMDPSLDSPTIFLLSLKAGGVGLDLKAASRVFLMD
PGWNPAVEEQCFDRCHRLGQKRDVNITKFLVEDSVEERMLALQEKKQALMTGAFSKKKSA
DERQEDNINRIKMLFGF
NT seq 2754 nt   +upstreamnt  +downstreamnt
atgtttggcagtatccttggcgttgtcagaattcaacattttaaaggaagagttgaggca
aaagaaaagttgatgttaaaacgagacgatgagtattataaaaatgctatccaagtggtt
aacatggattctgaacaagttggtcatattaaacgcgatctggcggaaactttaactttc
atactggataataaacttgcacgattagaaggagttgcagtcatgggttatttatacaag
catgcaatgagactagagataacattgtggggagatctggagaagaaggaggaagcgttt
tctgttttaagatctcgtggttttactccaaaagaaaattctggtgaaacctcatccagt
caagcttctagcagtcatttgtctggttgtcaagaatcaggtcatcaagttaaaactgaa
atggataaattatttgattcgctagaagaggggggcaagacggccatggctgaaccaaca
caggctataagaacaccgctatacccccatcagaaacaggcgttaaactggatgatatgt
aaggagaataatgaagcgttaccaccgttctgggagaaaggaggacaccgttattacaat
agtttaacagggtatactacttctcatagaccatctacagttcacggaggtattttggca
gacgacatgggacttggaaaaactctggaagttatctcccttattttaaccaatttccac
gatggtcagccattggccacaccagatgtcagtcaaaaacacctcagccaacacaaggtt
gtgactgacaacagcaaggttgtgactgacaacagcaaggttgctactgacaacagcaag
gttgtgactgacaacagcaaggttgtgactgacaacagcaaggttgctactaacaatgga
caagttcagactgttgctgatgtcttgctcgattttcttaaaccagattcttccaacgac
tttgaagtgaaatcaaatgaacatgaggtcaaatcattggaccctaaatcaaatgactgt
gaatttaagttgaaaaataaatcagaaaaaaagatgctaactgacagtgataaaaattct
aatagtgctccatgtatagacttaacatcacagggtgctaaacatagcgacatggttgct
actgacaacggacaagttcagactgtggccgacgtctttacgacagacaaaccacgaaca
actctaataatctgtccactgtcagttatttacaattggcagtgtcagttggaggaacat
gtaagagaagatgtcaaattaaaaatttacaagtttcatggcagtcatcgaaccactgac
agtaaattactagagagccaagacgttgttatttctacttatggtaccataacggctgaa
tttaagggtggcaatcgtttacgtaaaattcattggttacggatcattctagacgagggt
catgaaatccgaaatcctgacaccctgagggccctggctataacggaactgaaagctgaa
agaaaatgggtgataacaggaacaccaattcagaataacctcagagatttatattcactg
gttaattttctagatatcagtcctctcaatcaattatcgttgtggcgaaaaactattgaa
cgtccaatattccatggagatgagtccgctatcacacgtgttcgagcgttggtggcgaat
attggactgagacgaacgaagaatcaacaagttaacggtaaaccattggttgaactacca
gctagaaatgtatttatagaaaaaatcaagttttctgaagaagaacgacaagtttataat
gatatggagacacatggaaaacggatcataaaagggaatggcaatcatggtttaccggat
ctacgtccatattgtcatgtgaccataaatatggatggaggtgatcaaccacaagatgac
accactgaccttatagatgacgaaactaaacagaaactaattgatgatctcttagcagtg
ttaaattctgggtctgatgaggaatgttcaatttgtttagacagtctaaaacaccctgtt
ataacactctgtgctcatgtttattgtcgtacctgtattgaaaacgtcatacaacaaaat
aacacgatgacaacagcatgtccgatgtgtcgagaagaaataaagttaggtttttggttt
ggagttcctgaaaaacaacaaccggagatacctgtgattactgatgaaaactggcagtcc
agtagcaaggtagatgcattaatgaaagctctagttcaacaacgtattgatgaccctact
gttaaaagtatcatagtttcacagtttacatctctactgactcttattgaggtaccattg
agattaaatggttttaagtttgctcgactagatggtaaaatgactaacaagaaaagagtt
gataatatggagatgtttatggacccatcactcgactctcctaccatatttctactgtca
ctgaaggctggaggagttggactagatcttaaggcagccagtcgcgtctttctaatggat
cctgggtggaatccggcagtagaagaacagtgttttgacagatgtcacagattaggacaa
aaacgtgacgtcaacataacaaagttcctggtagaagactcagtagaagaaagaatgttg
gcgctacaggagaaaaaacaagccttgatgactggagcattcagtaaaaaaaaatcagct
gatgaacgtcaagaagataatatcaatcgaattaaaatgttgtttggtttctag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   RefGene (34)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (18)   
   Pfam (18)   
All databases (67)   

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