KEGG   Lottia gigantea (owl limpet): LOTGIDRAFT_206001
Entry
LOTGIDRAFT_206001 CDS       T03273                                 
Name
(RefSeq) hypothetical protein
  KO
K07374  tubulin alpha
Organism
lgi  Lottia gigantea (owl limpet)
Pathway
lgi04145  Phagosome
lgi04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:lgi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    LOTGIDRAFT_206001
  09142 Cell motility
   04814 Motor proteins
    LOTGIDRAFT_206001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lgi03019]
    LOTGIDRAFT_206001
   03036 Chromosome and associated proteins [BR:lgi03036]
    LOTGIDRAFT_206001
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lgi04812]
    LOTGIDRAFT_206001
   04147 Exosome [BR:lgi04147]
    LOTGIDRAFT_206001
Messenger RNA biogenesis [BR:lgi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     LOTGIDRAFT_206001
Chromosome and associated proteins [BR:lgi03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     LOTGIDRAFT_206001
Cytoskeleton proteins [BR:lgi04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    LOTGIDRAFT_206001
Exosome [BR:lgi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   LOTGIDRAFT_206001
  Exosomal proteins of other body fluids (saliva and urine)
   LOTGIDRAFT_206001
  Exosomal proteins of colorectal cancer cells
   LOTGIDRAFT_206001
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 20245884
NCBI-ProteinID: XP_009045294
JGI: 206001
UniProt: V4BCE3
Position
Unknown
AA seq 461 aa
MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLD
RTRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPQISTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGLIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGVDSVEDFGTVKSKYIHDSTQSFRKK
NT seq 1386 nt   +upstreamnt  +downstreamnt
atgcgtgagtgtatctctatccatgttggtcaagctggtgtccagatgggcaatgcttgt
tgggagttgtactgtttagaacatggtatccaacctgatggtcagatgccttctgataaa
actattggaggtggagatgattccttcaacactttcttcagtgagacaggagctggtaaa
catgtgccaagagctgtttttgttgatctggaaccaacagttgtagatgaagtccgaact
ggtacttaccgtcaactcttccatcctgaacaactcatcactggtaaagaagatgctgcc
aataattatgcccgaggtcactacactgtgggtaaagagctcattgatttggttctcgac
agaaccaggaagctggctgatcaatgtactggtcttcaaggatttctcatcttccacagt
tttggtggaggaaccggatctggtttctcttccttgttgatggaaagattgagtgtggac
tatggcaagaaatccaagttggagtttgctgtttatcctgctccacaaatatcaactgct
gtggtagaaccttacaactctatccttacaacccataccacattggaacattccgattgt
gccttcatggtggataacgaggctatctatgatatatgtcgacgaaatctcgacattgaa
agaccaacctacaccaacttgaaccgattgattggtctaatcgtcagctccatcactgct
tcacttcgatttgatggtgccttgaatgtcgatcttactgagttccagaccaacttggta
ccctacccacgtattcatttcccattggctacctatgcacctgtcatttccgccgagaaa
gcttaccatgaacaactttctgtagctgaaatcaccaacgcttgtttcgaaccagccaat
cagatggtcaaatgtgatcctcgtcatggtaaatacatggcttgctgtatgttgtaccga
ggtgatgttgttcccaaggatgttaatgctgctattgccaccatcaagaccaagagaacc
atccaattcgtcgactggtgtccaactggtttcaaagtgggtattaactaccaaccacca
actgttgtaccaggaggcgatttagccaaggtccagagagctgtttgtatgttgagtaac
acgactgctattgctgaagcttgggctcgtcttgatcataaatttgatctgatgtacgcc
aagagagctttcgttcactggtatgttggtgaaggtatggaagaaggtgaattctctgaa
gctagagaagatttagctgctctagagaaagattatgaagaagttggagttgattctgtt
gaagatttcggaaccgttaaatcaaaatatattcatgactctacacaatctttcagaaag
aaataa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (236)   
   KEGG ORTHOLOGY (1)   
   RefGene (231)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (250)   

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