KEGG   Lysinibacillus varians: T479_00020
Entry
T479_00020        CDS       T03062                                 
Name
(GenBank) recombinase F
  KO
K03629  DNA replication and repair protein RecF
Organism
lgy  Lysinibacillus varians
Pathway
lgy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lgy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    T479_00020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lgy03400]
    T479_00020
DNA repair and recombination proteins [BR:lgy03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     T479_00020
SSDB
Motif
Pfam: SMC_N AAA_15 AAA_23 DUF2813 AAA_21 AAA_27 AAA_29 HBM
Other DBs
NCBI-ProteinID: AHN20052
UniProt: A0A806LFH8
Position
3430..4545
AA seq 371 aa
MHIEQLKLTNYRNYDALTLKFSPKINVFIGENAQGKTNVMESIYVLAMAKSHRTTNDKEL
IRWDSDYGKIEGAVQKRHGILPIELTITKKGKKGKINHIEQSRLSHYIGQMNVVMFAPED
LNVVKGSPQIRRRFIDMEIGQISPVYLHDLLTFQKILKQRNHYLKMNQGKIMTNDVMYDV
YNEQYIHAATQIIRKRFQFMDLLQEWAEPIHAGISQGKETLMIKYRTVAGIDKGQTASEM
EDLLLKKLVEAKNREFERGVTMVGPHRDDLQFLVNGYDVQTYGSQGQQRTTALSLKLAEI
ELIKQETNETPILLLDDVLSELDDYRQSHLLNTIQGEVQTFVTTTSVDGIHHETMEHAQL
FHVKQGAIEES
NT seq 1116 nt   +upstreamnt  +downstreamnt
atgcatattgagcagttaaaacttacaaattaccgcaactatgatgcgttaacgttaaaa
ttctctccaaaaataaatgtatttattggtgaaaatgcccaaggaaaaacaaatgtgatg
gaatccatctacgtattagcgatggctaaatcacatcgcacgacgaacgataaagaattg
atacgttgggattcagactatggtaaaatagaaggggccgttcaaaaaaggcacggtatt
ttaccaatagagcttaccattacgaaaaagggcaaaaagggtaaaattaatcatattgaa
caaagtcgtcttagtcattatattggtcaaatgaatgtggttatgtttgcgccagaagat
ttaaatgttgttaaagggagcccgcaaatacgacgacgttttattgatatggagattggg
caaatttcgcccgtctacttacatgatttattaacctttcaaaagattttaaaacaacgc
aatcattatttgaaaatgaatcagggtaagataatgacaaacgacgtgatgtatgatgtt
tataatgagcagtatattcacgcagctacccaaattattcgaaaaagatttcaatttatg
gatttattacaagagtgggcagagccgattcatgcaggaatttcacaaggtaaggaaact
ttaatgattaaataccgcactgtagcaggtattgataaaggacagactgctagtgaaatg
gaagatctcttactgaaaaagttagtagaggcaaagaatcgtgaatttgagcgtggtgtc
acgatggttggaccacatcgtgatgatttacaatttttagtgaatggctatgatgtgcaa
acatatggctcacaagggcaacaacgaacaactgctctgtcattaaagctcgccgaaatt
gagttaattaaacaagaaacaaatgaaacacccattctacttttagacgatgtattgtcg
gaactcgatgattatcgccaatcgcatttattaaataccattcaaggtgaagtccaaacc
tttgtaacgactacaagtgttgatggaattcatcatgagacgatggaacatgctcagctg
ttccacgtgaaacaaggtgcgattgaagaaagttag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (16)   

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