KEGG   Lysinibacillus varians: T479_23155
Entry
T479_23155        CDS       T03062                                 
Name
(GenBank) RNA pseudouridine synthase
  KO
K06182  23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
Organism
lgy  Lysinibacillus varians
Brite
KEGG Orthology (KO) [BR:lgy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lgy03009]
    T479_23155
Enzymes [BR:lgy01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.21  23S rRNA pseudouridine2604 synthase
     T479_23155
Ribosome biogenesis [BR:lgy03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    T479_23155
SSDB
Motif
Pfam: PseudoU_synth_2 S4 S4_2 TruB_N PCNA_C
Other DBs
NCBI-ProteinID: AHN23785
UniProt: A0A806LQ18
Position
4550713..4551414
AA seq 233 aa
MRINKYLSEAGIVSRRGADKWVEEGKVTINGVLATVGSQVEAGDIVCVDGKEVKKEEQLV
YIALNKPVGITSTTERHIKGNVVDFINHPLRIFHIGRLDKESEGLLLMTNDGDIVNKILR
AENHHEKEYIVQVDKPITEQFIKKMAAGVDILDTTTLPCYVEKISDKVFKIILEQGLNRQ
IRRMCSALGYSVKRLQRIRIMNIKLGNLKVGQWRDLTDKERAELFKLLNYTVK
NT seq 702 nt   +upstreamnt  +downstreamnt
atgagaattaacaaatatttaagtgaagcgggcatcgtgtctcgtcgtggtgctgataaa
tgggtcgaagaaggtaaagtaacaatcaatggcgtacttgctactgtgggcagccaagta
gaagcgggcgatattgtttgtgtggatggcaaagaggtaaaaaaagaagagcaactagtt
tatattgccttaaacaaaccagttggtattacaagtacaacagagcgtcatatcaaagga
aatgtcgttgattttatcaatcatcctctacgcattttccatattggtcgactggataag
gaatctgaaggattattattaatgaccaatgatggcgatattgtaaataaaattctacgt
gcagaaaaccaccatgaaaaagaatacatcgtacaagttgataagccgataacagaacaa
tttattaaaaagatggctgcaggcgttgatattttagatacaacgacattaccttgctac
gttgaaaaaatttcagataaagtgtttaaaattattttagagcaaggcttaaatcgccaa
atacgccgtatgtgttcagcattagggtattccgttaaacgattacagcgcatacgcatt
atgaatattaagcttggcaatttaaaggtcgggcaatggcgcgatttaactgataaagag
cgagcagaattatttaaactacttaattacacagtaaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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