KEGG   Laribacter hongkongensis: LHK_02425
Entry
LHK_02425         CDS       T00884                                 
Symbol
syk
Name
(GenBank) Syk
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
lhk  Laribacter hongkongensis
Pathway
lhk00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:lhk00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    LHK_02425 (syk)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:lhk01007]
    LHK_02425 (syk)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lhk03016]
    LHK_02425 (syk)
Enzymes [BR:lhk01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     LHK_02425 (syk)
Amino acid related enzymes [BR:lhk01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   LHK_02425 (syk)
Transfer RNA biogenesis [BR:lhk03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    LHK_02425 (syk)
 Prokaryotic type
   Other AARSs
    LHK_02425 (syk)
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon
Other DBs
NCBI-ProteinID: ACO75407
UniProt: C1DB68
Position
2316555..2318066
AA seq 503 aa
MSEQDITSQPAQDENQIMAERRQKLTEIRTSKGIAFPNDFRRQHLAAPLHAQYDATDKEA
LEAQPVEVVVAGRMMLKRVMGKASFATVQDSSGRIQFYISRDKVGEDVYADFKTWDMGDI
LGAKGTLMKTKTGELSVEVSELRLLSKSLRPLPDKFHGLADQEQKYRQRYVDLIINQDSR
DTFIKRSKIVQTVREVMVGEDYLEVETPMMHPIPGGAAAKPFVTHHNALDMPLYLRIAPE
LYLKRLVVGGLERVFEINRNFRNEGMSTRHNPEFTMIEFYEAYCGYERMMEMTEKIIRRC
AEAACGTTKVTYNGKEVDLGKPFDRFTIVGAIKHYNPQYTDEQLADEAWLKSEIKALGGK
LPPAPGIGSLQLALFEECAEGKLWNPTFIIDYPVEVSPLARGSDADPSITERFELFIVGR
EHANGYSELNDPEDQAARFRSQVEQKDAGDDEAMHYDADYIRAMEYGLPPTGGCGIGIDR
LVMLLTDAPSIRDVILFPHMRPE
NT seq 1512 nt   +upstreamnt  +downstreamnt
atgtccgaacaagacatcacgagccagcccgcgcaggatgaaaaccagatcatggccgag
cgtcgccagaagctcaccgagatccggaccagcaaaggcatcgccttccccaacgatttc
cgccgccagcacttggctgccccgctgcacgcacagtacgatgccaccgacaaggaagcg
ctcgaagcccagccggtcgaagtcgtcgtcgccggccgcatgatgctcaagcgtgtgatg
ggcaaggccagctttgccacggtgcaggacagctcgggccgcatccagttctacatcagc
cgcgacaaggtgggtgaagatgtctacgcggacttcaagacctgggacatgggtgacatt
ctcggcgccaaaggcaccctgatgaagaccaagaccggcgaactgtcggtcgaagtgagc
gagctgcgcctgctctccaagtcgctgcgcccgctgcctgacaaattccacggtctggct
gaccaggaacagaaataccgccagcgttacgttgacctgatcatcaaccaggacagccgt
gacaccttcatcaagcgctcgaaaatcgtacagaccgtacgcgaagtcatggtgggcgaa
gactacctcgaagtcgaaaccccgatgatgcacccgatcccgggtggcgctgctgccaaa
ccgttcgtcacccaccacaatgccctcgacatgccgctctacctgcgcatcgcaccggag
ctgtacctcaagcggctggtcgtgggcggactggagcgcgtgttcgaaatcaaccgcaac
ttccgcaacgaggggatgagcacccgccacaaccccgagttcaccatgatcgagttttac
gaggcctactgcggctacgagcgcatgatggagatgaccgaaaagatcatccgtcgctgc
gctgaagcagcctgcggcaccaccaaggtgacctacaacggcaaggaagtcgatctgggc
aagccgtttgatcgctttaccatcgtcggtgccatcaagcactacaacccgcaatacacc
gacgaacagctggccgacgaagcctggctcaagagcgaaatcaaggcgctgggcggcaag
ctgcccccggctccgggcatcggcagcctgcaactggccctctttgaagaatgcgccgaa
ggcaagctgtggaatccgaccttcatcatcgactacccggttgaagtctcgccgctggca
cgcggctcggatgccgatccgtcaatcaccgagcgcttcgagctcttcatcgtcggccgc
gaacatgccaacggctattcggagcttaacgatccggaagaccaggctgcccgcttccgc
tcgcaagtcgagcaaaaggatgccggcgacgatgaggccatgcactacgacgccgactat
atccgtgccatggaatacggtctgcccccgaccggcggctgcggcatcggtattgaccgt
ctggtcatgctgctgaccgatgccccgtcgatccgcgatgtcatcctgttcccgcacatg
aggcctgaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (31)   

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