KEGG   Paucilactobacillus hokkaidonensis: LOOC260_113320
Entry
LOOC260_113320    CDS       T03598                                 
Name
(GenBank) competence protein ComEB
  KO
K01493  dCMP deaminase [EC:3.5.4.12]
Organism
lho  Paucilactobacillus hokkaidonensis
Pathway
lho00240  Pyrimidine metabolism
lho01100  Metabolic pathways
lho01232  Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:lho00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00240 Pyrimidine metabolism
    LOOC260_113320
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lho02044]
    LOOC260_113320
Enzymes [BR:lho01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.12  dCMP deaminase
     LOOC260_113320
Secretion system [BR:lho02044]
 Type II secretion system
  Competence-related DNA transformation transporter (DNA-T) core components
   LOOC260_113320
SSDB
Motif
Pfam: dCMP_cyt_deam_1 MafB19-deam Bd3614-deam
Other DBs
NCBI-ProteinID: BAP85868
UniProt: A0A0A1GY55
Position
complement(1328361..1328837)
AA seq 158 aa
MADKRIDWDQYFMIQAVLLASRSTCKRLSVGATIVRDKRIIAGGYNGSVSGDEHCIDSDC
YLVEGHCVRTIHAEMNAILQCAKFGVSTDGASVYVTDFPCLQCTKMLLQAGITQINYLRN
YNNDEYAMKLLRLKQIKLNHIQLDHDILHETRLDQYLI
NT seq 477 nt   +upstreamnt  +downstreamnt
atggcagataaaagaatcgattgggatcaatattttatgattcaggctgtattactggcc
tcacgcagtacttgtaaacgattgtcagttggagccacaatcgtcagagataagcgcatc
attgccggtgggtacaatggctcagtttctggggatgagcattgtattgactcagattgt
tatttggtagaaggacattgtgttcggacgattcatgctgaaatgaatgctattttgcag
tgtgctaagtttggtgtttcaaccgatggcgcaagtgtatatgttactgattttccgtgt
ttacagtgtactaaaatgttattacaagcaggaattacacaaattaactatttgcgtaat
tacaataatgatgagtatgcaatgaaattattaaggttaaagcaaattaaattaaatcac
atccaattagatcatgatattttgcatgaaacacggctagatcaatatttaatctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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