KEGG   Lactobacillus helveticus R0052: R0052_07650
Entry
R0052_07650       CDS       T02217                                 
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
  KO
K01925  UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
Organism
lhr  Lactobacillus helveticus R0052
Pathway
lhr00470  D-Amino acid metabolism
lhr00550  Peptidoglycan biosynthesis
lhr01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:lhr00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    R0052_07650 (murD)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    R0052_07650 (murD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:lhr01011]
    R0052_07650 (murD)
Enzymes [BR:lhr01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.9  UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
     R0052_07650 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:lhr01011]
 Precursor biosynthesis
  Amino acid ligase
   R0052_07650 (murD)
SSDB
Motif
Pfam: Mur_ligase_M MurD-like_N Mur_ligase_C Mur_ligase 2-Hacid_dh_C TrkA_N
Other DBs
NCBI-ProteinID: AFR22313
Position
complement(1344055..1345434)
AA seq 459 aa
MKDIKTYSNKNILVLGLGKSGFAVSELLLKLGAKLTLNDKADLDKNEKAQELKAKGVRVI
GGHHPVDLLEKEHFDYLVKNPGIPYENPMVKKAEELNIPIITEPEIALSCSDAPYVCVTG
SNGKTTTVMLTQRILDHHLQKSGHHAYAVGNIGVPISEVVPKATKDDILVVEISSFQLLG
VTDIDPKVAAIVDIYNNVHLDYHKTFENYVNAKLNVTRTQNSDDYFIANYDQKDILAKEK
EVTPAKMQTFSETDSSADYFIGDEYLESQNEKIMKIVDIKLPGIHNLQNSLVAIAISKVM
GADNDDIAAVLSTFTGAKHRLQYVTTLDGRKVYNDSKSTNIEAATVAIPSFKEPEVLIAG
GLDRGFLFDDLVPLFKKHVKSIVLYGETKYLLADAARKAGIKDIVIVNTLQEAVPRAYEL
SEPGDVILFSPACASWDQFRTFEDRGDYFVKFVKELKTK
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgaaggatattaaaacttatagtaataagaatattttagttttaggtctaggtaaaagt
ggatttgcagttagtgaattacttttaaaattaggtgctaaattaaccttaaatgataag
gctgatcttgataaaaatgaaaaagcacaagaattaaaggctaaaggcgttcgtgtaatt
ggcggacatcacccagttgatttgcttgaaaaagaacattttgattatttggttaagaac
ccaggtattccatatgagaatccaatggttaaaaaggctgaagaattaaatattccaatt
attacggaacctgaaattgctttaagctgcagcgatgctccttatgtttgtgttactggt
tcaaatggtaagaccactactgtaatgcttactcaaagaattttagaccatcatttacaa
aaatcaggtcatcacgcttatgcagtaggtaatattggtgtaccaatttctgaagtagtg
ccaaaggcaactaaagatgatattttggtagtagaaatttcaagtttccaattattgggt
gtaactgatatcgatcctaaggtagcagctattgtagacatttataacaatgttcaccta
gattatcacaagacctttgaaaattatgtaaatgctaagttgaacgttactagaacacaa
aatagtgatgattacttcattgcaaactatgatcaaaaagatattttagctaaggaaaaa
gaagtaactccagctaaaatgcaaactttctcagaaacagattccagtgcagattacttt
atcggcgatgaatatcttgaaagtcaaaatgagaagatcatgaagattgtagatatcaag
ttgccaggtatccataatttgcaaaatagtttggttgcaatcgcaatttcaaaagttatg
ggtgcagacaatgatgacattgcggcagttttgagtaccttcactggtgctaagcaccgt
ttgcaatatgtaacgactcttgatggacgcaaggtttataatgattctaagtcaactaat
attgaagcagctacagtggctattccttcatttaaagagccagaagtcctgatcgcaggt
ggtcttgatagaggattcttgtttgatgatttagtaccattgttcaagaagcatgttaaa
tcaattgttctttatggagaaaccaaatatctgttggctgatgctgctagaaaagctggc
attaaagatattgtaattgttaatactcttcaagaagctgttccaagagcatatgaatta
agtgaacctggtgacgtaatcctattctcaccagcatgtgcttcatgggatcaatttaga
acctttgaagatcgtggcgattactttgtaaagtttgttaaggaattgaagactaaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (24)   

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