KEGG T04898: 105671415

Linepithema humile (Argentine ant): 105671415

Entry

105671415         CDS       T04898

Name

(RefSeq) transducin beta-like protein 3

K14555

U3 small nucleolar RNA-associated protein 13

Organism

lhu Linepithema humile (Argentine ant)

Pathway

lhu03008

Ribosome biogenesis in eukaryotes

Brite

KEGG Orthology (KO) [BR:lhu00001]
09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    105671415
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lhu03009]
    105671415
Ribosome biogenesis [BR:lhu03009]
Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    105671415

SSDB

Motif

Pfam:

WD40 Utp13 ANAPC4_WD40 NBCH_WD40 Nup160 WDR54

Other DBs

NCBI-GeneID:

105671415

NCBI-ProteinID:

XP_012220990

Position

Unknown

AA seq 799 aa
MSKANLKEAFEVECKQGAFYTGGNIQWSKDGEHLFCQKGGIVSVISVSKGSVISSLGQTD
AGQQEDMINCFTLDDDGISLITHHKSGLFKLWDWKENKLTKLWKSIHKGPVARITLLNGI
ALMASGGSDSAVRLWDLQHHTCTHNLKGVQGVISVLEFHSDVEKQLLFAAGDDAKIHGWD
ITTGQEKITLSGHFSKVTSLSFHENGNYLISSGRDRVLILWDISSGTSIRVLPVYEGIEG
AFIIRSEVLPAFVKSHKSNGIYVASAGEKGVVKIWEMKTGRQIYEQDDSLVPPAKEEGSL
SITHLLYNSICNLFAVVSVDHNIIIHSLDLFECKKQLVGYSDEILDVAYLGADDSHIALA
TNSCDIKFYDIASMNCQLLCGHTDSILALATSPANVNLLVSSAKDNSVRVWLLDKETTRM
SCIGHAVRHTASISSVAISQTSTKFFTTVAQDSCLKLWELSDNVEAHSQDLPLNVNHTVL
AHQKEINCVAVSPNDRLIATASQDKTAKLWSAEDLQLLGVFHGHRRGVWCVRFSPADQVL
LTTSADCTMKLWSLTELNCLKTFEGHESSVLRGEFLSRGLQLITAGGDGLLKLWNVKTSE
CMSTLDQHESHVWTLAVTKDQKHIISGGSDSLLVIWRDVTEERRAREASEKEQLALEEQK
LANLLKAEELHAALRLALKLERPLQVLKIAEAILRKGNNELVEIIKELKPVRKQALLRCA
VTWNTNSRNSHAAQVVINALITEIGTQQLQMSGLSSTLEATIPYTDRHFKRLTKLLQDLH
LLTYTVNRMKPNIVSIGTK

NT seq 2400 nt +upstreamnt +downstreamnt
atgagcaaagctaatttgaaagaagcgtttgaagtggaatgcaaacaaggagcgttttac
accggtggaaatatacaatggagcaaggacggagagcacttattctgccagaaaggcggc
attgtgtctgtaatatctgtgagcaaaggctctgtgatatcatctttgggtcagacggat
gctggtcaacaagaggatatgataaattgcttcactcttgacgacgatggcataagctta
atcactcatcacaaaagtggattgttcaaattatgggattggaaagagaataagttgaca
aaattatggaaatctattcataaaggaccagtagcgagaataactcttttaaatggtatc
gctttaatggcgtctggtggaagcgacagtgctgttcgattgtgggatttgcaacaccac
acatgtacacataatctcaaaggagtgcagggagtgattagtgtgttggagttccattcg
gatgttgaaaagcagcttctttttgctgctggcgacgatgcaaagattcacggttgggac
atcactactggacaggaaaagattactctgtctggacatttcagcaaagtaacatcactt
agctttcacgaaaatgggaattacctgattagttcagggagagacagagtgctaattcta
tgggacatatcatctggaacatccatacgcgttttaccggtgtatgaaggaatagaagga
gcgtttataatacgctctgaagtcctgccagcatttgttaaatcgcacaaaagtaatggt
atatatgttgcctcagctggtgagaaaggtgtcgttaaaatctgggagatgaagacaggc
aggcagatttacgaacaagacgattctctggtgccaccggctaaggaagaagggagtctg
tcgattacgcacttactttacaatagtatctgcaatctttttgcggtggtatccgtcgat
cacaatataatcatccactcattggatttgtttgaatgcaaaaagcagttggtgggttac
agcgacgaaattctggacgtcgcgtatctcggagctgatgatagccacatcgcgctcgcg
accaatagctgcgacataaagttctacgatatcgcctcaatgaactgccagctgttgtgc
ggtcataccgacagcattttggcacttgctacgagtccggcaaacgtgaatctgctcgtg
tcttcggccaaggacaacagcgttcgtgtatggcttttggacaaagagacgacaagaatg
tcttgcatcggacacgccgttagacacacagcatccatcagttctgtcgctatatctcaa
acatcgactaaattcttcaccaccgtcgctcaagattcctgcctgaagctgtgggaattg
tccgacaacgtggaagcgcacagtcaagatttgccattaaatgtaaatcatacagtatta
gcacatcaaaaggagataaactgcgtggccgtctcgccaaatgatagattgatcgccaca
gcatcgcaggataaaactgctaagttgtggtccgcggaggatttgcagctgctcggcgta
tttcacggccatcgaagaggcgtatggtgcgttcgattctcgccagccgatcaggtgctc
ctcaccacgtccgccgattgcacgatgaaactgtggtccttgactgagctcaattgtctg
aaaacgttcgaaggacacgagtcctccgtcttgaggggggagtttctgtcgcgcggtttg
caactcattacggcgggcggagacggtcttttgaaattgtggaacgtcaaaacgtccgaa
tgcatgtccactttggatcagcacgagagccacgtttggacgctcgcagtgacgaaggat
cagaagcacataatcagcggcggcagtgactcattgttggtcatttggagggatgtgact
gaggaaaggcgggcgcgagaggcgtcggaaaaagagcagctcgcgctcgaagaacagaag
ttggcgaatttgctgaaagctgaagaactccacgccgcgttgcgattagctctcaaattg
gagcggccgttgcaagtcctcaagatcgcagaagccatattgagaaagggaaataacgag
ctcgtggaaatcataaaggaattaaaaccagtccgcaaacaagcgttactcaggtgcgcg
gttacgtggaacacgaatagtcggaattcacacgccgctcaggtggtgataaatgctttg
ataacggagatcggcactcagcagctgcagatgtcgggattatcttccactctagaagct
acgataccttatactgatagacacttcaaaagattaaccaagcttttgcaggatcttcac
ctattgacttatacggttaatcgcatgaaacctaatattgtatcaattggcactaaatag

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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