KEGG   Lactobacillus helveticus CNRZ32: lhe_0946
Entry
lhe_0946          CDS       T02744                                 
Name
(GenBank) excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
lhv  Lactobacillus helveticus CNRZ32
Pathway
lhv03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lhv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    lhe_0946
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lhv03400]
    lhe_0946
DNA repair and recombination proteins [BR:lhv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     lhe_0946
SSDB
Motif
Pfam: UvrC_RNaseH_dom UVR GIY-YIG HHH_5 5_3_exonuc HHH_2 RE_Eco29kI
Other DBs
NCBI-ProteinID: AGQ23454
Position
1109758..1111560
AA seq 600 aa
MATQLIENKLKLLPEKPGCYLMKDINGTVIYVGKSKNLKNRVRSYFKSMQVGRRAELVRE
IRDYDIITVSTDKEAFLLEITLIKKYQPYYNVQLKQGTGYPYIEITREHDPQTRLTSIVC
KDGGYYFGPYPNVYAAQATLKFIQKVFPLRRCHGYQGRPCLYYHMGQCLGACFKKVPQKE
YDEQIKKIKRFLNGDIGAVKQDLTQKMEQASEQLEFERAAEIRDQLKYIEETVEKQKIIS
NDNTQRDIFNYYVDKSWISIQIFFLRQAKLLRRETRMFPLTDTTDPEDAFTSFIVQFYGQ
KNRVLPKEVLIPAGFDNDTLAEVLTVPVRTPQRGQKKSLLDMAKDNAKLKLDDKFRLLEL
GNRKTKGAQKEIFDALGLPYGHIIESFDHSHIQGADPVSALVVFKDGEPDKTSYRKYKLK
GEVEHQNGGDEVRNTREVVRRRYGRLLREHKKMPDLILMDGGQIQVDACEDVLRNELNLN
IPVAGMVKDDKHRTNHLLFGDPINGVPLKLIPLNPKSEGFYLMTRIQDEVHRFAITFHRR
RHAKNALSSRLDSIKGIGPKSRNKLLRKFGSLKKIKEASVDDLRAAGLTLPQAQTVKLML
NT seq 1803 nt   +upstreamnt  +downstreamnt
atggcaacacaattaattgaaaataaattaaaacttttgccagaaaaaccgggctgttat
ttgatgaaagatattaatggtacggttatttatgtgggcaaatccaagaatttaaaaaat
agagtacgttcttattttaagagtatgcaagtaggacgcagagcagaacttgttcgtgaa
atcagagattacgatatcattactgtttctacagacaaggaagcctttctattagaaatt
actttaatcaagaaatatcaaccatattataatgtacaattaaagcagggaactggttat
ccatatattgaaattacgcgtgaacatgatccacaaacacgattaactagtattgtgtgc
aaagacggaggctattattttggcccttatcccaatgtctatgcggcacaagctacctta
aagtttattcaaaaagtttttccgttgagacgctgtcacggttatcaaggacgaccatgt
ctttattatcatatggggcaatgccttggtgcatgttttaaaaaggtgcctcaaaaggaa
tatgacgaacagattaaaaagattaaacgctttttgaatggggatattggtgcagtcaag
caagatttaactcaaaaaatggagcaagcttctgagcagcttgagtttgaacgagcagct
gaaatacgcgatcaattgaagtacattgaagaaaccgttgaaaagcaaaaaatcatttct
aatgataatacgcagcgtgacatctttaactattacgttgataaatcttggatctctatt
cagatcttcttcttgcgtcaggctaaattgttgcggcgtgagacacggatgtttccgttg
accgataccactgacccagaagatgcatttacttctttcattgtgcaattctatggtcaa
aaaaaccgtgttcttccaaaagaagtattgattccagctggatttgataatgatacgtta
gctgaggttttaacagtcccagttagaacgcctcaacgcggtcaaaagaaatcactgctt
gatatggctaaagacaatgccaagttaaaattagatgataaatttagattattagaacta
ggcaatcgaaaaaccaagggtgcacaaaaagaaatttttgatgcgttgggcttgccatat
ggtcacattattgaaagttttgaccactcccatattcaaggtgcggatcctgtctctgct
ttagtagtgttcaaagatggagaacctgataaaacatcttatcgtaaatataagttaaaa
ggcgaagtagagcatcaaaacggtggcgatgaagtccgcaatactcgtgaagtagttcgc
cgccgctatggacgtttactgcgagaacataagaaaatgccagatttgattttaatggat
ggtggtcaaattcaggtggatgcctgtgaagatgttttgcgaaacgagcttaatttgaat
attccagtagccggaatggttaaggatgataaacaccggactaatcacttattatttggt
gatcctattaatggcgtgccattgaaattgatcccattaaatcctaagtctgaaggcttt
tatttaatgacaagaattcaggatgaagttcaccggtttgcaattacttttcaccgcaga
agacatgctaaaaatgctttatctagtcggttagattcaattaaaggcattggtcctaag
agtcggaataagttattgcgcaagtttggctcattgaagaagattaaagaagcttcagta
gatgatttacgtgcggcagggttgacattgccccaagcacaaactgtaaaattaatgttg
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

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