KEGG   Listeria ivanovii subsp. ivanovii WSLC 3010: JL52_11820
Entry
JL52_11820        CDS       T03400                                 
Name
(GenBank) ATP-dependent helicase
  KO
K16898  ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
Organism
lii  Listeria ivanovii subsp. ivanovii WSLC 3010
Brite
KEGG Orthology (KO) [BR:lii00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lii03400]
    JL52_11820
Enzymes [BR:lii01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     JL52_11820
DNA repair and recombination proteins [BR:lii03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AddAB pathway proteins
     JL52_11820
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PDDEXK_1 UvrD_C_2 DEAD AAA_12 ResIII
Other DBs
NCBI-ProteinID: AIS66193
Position
complement(2427858..2431568)
AA seq 1236 aa
MSLNIPDKPSSSTWTDDQWKAIQADGKNILVAAAAGSGKTAVLVTRIIEKLIDETAKWNV
DELLIVTFTNASAAEMKFRIGKALEEALAQNPDSAHLKKQVALLNYASISTLHSFCLEII
RKHYFEADIDPNFRLIEPIESSMIRDEVLEDLLEEAYGIKDNDPFFHLVDSFTGDRTDTE
LHLLISKLYDFSRANPEPDIWLEKIVDLYETNNITSITELPYFPIIKEDIELRINQAKND
LLTAIEYASDTGGPEPYLGTLEGDLAQINMLSQVNWDSWEDVKISIKSVDFKRIPTLKNK
SDYDEEYVEQTKKFRDAAKKEIKNILIDWFSRNEVNYLADLEKMKPDIKALSELVKKFAQ
NFFKEKQKRGVLDFNDLEHLALKILLKDGTPSEVAKSYQKQFKEVLIDEYQDTNMVQETI
LMLVTTVNETKGNLFMVGDVKQSIYRFRLAEPTLFMTKYQAYQQDGTGGGIRIDLSRNFR
SRKEVLDVTNFIFHQLMDNKVAEIDYDNAAELTLGSHFPESKNMATELLLIDMKTEEKET
EDDDLSPQELQKNQVEARAIALKVREMIDNKFPIYDKKMQQNRPIEYRDIVILARAMTSA
PDIEEAMKLQDIPFYANNNSGYFETTEVATMIALLKVIDNPYQDIPLAAVLRSPIIGLTE
EELGEIRMAKKKGYFFDALLTFKDSVISEAADKISEFIKQLNNWRELSIRENLTSLIWQI
YQETNFYEFIGGLPGGKQRQANLRALYDRANQYEKTSFRGLFRFVRFVERLEVRGDDLGT
AKTLGEKEDVVRMMTIHASKGLEFPVVIVSGLSKKFNMRDIYSKTLLDKDYGFASAYRDI
EKMIVYPTIMQQAMKQKKMREMIAEEMRVLYVALTRAEEKLILTATVPDFEKTSKQWLQV
AKEKETILPAAIRAKAKCYLDWIGHALIRHISFKELLCEEVIQPLPTDMLLQIEIKTKEM
FWSSEVTESKQDNLLAKVRAHQPVPVQSAYKDEIERFMNYQYKDEAATEIRAKQSVTELK
RQFTLQDSWSDTTLLKEFQKVSLDRPKFLQQNKLSATEIGTAMHTLMQAVSLENKPSINE
VRQLLQKMREKDILTEAQVKAINIEQILGFFESELGEKVLLEKDHVKREVPFSYLLPVAK
LYKQANIDEHVLIQGVVDSMIDQEDSIILIDYKTDKITGRYADWDAAEKVMKDRYQIQIK
LYAEAIQAISGKRVSEAYLYFFDGQHMCRINTEEGF
NT seq 3711 nt   +upstreamnt  +downstreamnt
atgagtctaaatatacctgataaacccagtagctcaacatggactgatgaccagtggaaa
gccattcaagcagatggaaaaaacattctagtagctgctgctgcgggttctgggaaaaca
gccgttcttgttactaggattattgaaaaattgattgatgaaacagctaaatggaatgta
gatgaattactaatagttacatttacaaatgcatcagcagcagagatgaaatttagaatc
ggcaaagctttagaggaggctcttgcgcaaaatccggattctgcgcatttgaaaaaacaa
gtggcattactaaattatgcttctatttcaacactgcattcattttgtttagaaattatt
cggaaacattattttgaagcagacattgatcctaacttccgtttaattgagccaattgaa
agtagtatgattagagatgaagtactagaagacttgttagaagaagcatatggtattaaa
gataatgatccgttctttcatttagtagattcatttacaggggatagaacagatactgaa
ctacacttgctcatatcaaagctatatgatttttcaagagctaatcctgagccagacatt
tggttagaaaaaatagtggatttatatgaaacaaataatattacatctatcaccgaatta
ccttattttccgattattaaagaagatattgagcttcgaattaaccaagctaaaaatgat
ttgttgactgctatagaatatgcaagtgacacaggtggaccggaaccataccttggtaca
ttagaaggagatttggctcaaatcaatatgctatcccaagtgaactgggatagttgggaa
gatgtgaaaataagtatcaaaagtgttgattttaagcggatacccacgctcaaaaataaa
agtgattatgatgaggagtatgtcgaacagacgaaaaagtttcgagacgcagcaaaaaaa
gaaatcaaaaatattttaatagactggttttccagaaatgaagttaattatttagcagat
ttagaaaaaatgaaaccagatattaaagctttaagtgaattggtgaaaaaatttgcacaa
aacttttttaaggaaaaacagaaacgaggagtcttagattttaatgatttagaacactta
gcgttaaaaatattactaaaagatggcaccccgtctgaagttgcaaagagttatcagaag
caatttaaagaagtgttaattgatgaatatcaagatacaaacatggtacaagagacaatc
ttaatgctagtaactacagtgaatgaaacaaaaggaaacttatttatggttggtgatgta
aagcagtctatttatcgtttccgtttagctgaacccactttatttatgacgaaatatcaa
gcatatcaacaagacggaacaggtggcggcatacggatagacttgtcacgtaatttcaga
agtagaaaagaagtcctagatgttacaaattttatttttcatcaattaatggacaacaaa
gtggcagaaatcgactatgataatgcggctgaattaacattaggttctcattttcctgag
tcaaaaaatatggcaacagaacttttattaattgacatgaaaacagaagaaaaggaaaca
gaagatgatgatttatctccacaagaacttcaaaaaaatcaagtagaagccagagctatt
gcgttgaaagttagggaaatgattgataataagtttccaatctatgataaaaaaatgcaa
cagaatagaccaatagagtaccgagatattgtcattttagcacgggcaatgactagcgca
cctgatattgaagaggcaatgaagcttcaagatatcccgttttatgccaataataattct
ggttattttgaaacaactgaagtggctacaatgattgctcttttgaaagtaattgataat
ccatatcaagatattccattagctgctgttttaaggtctccaattattggcttaacagaa
gaagaattaggagaaattcgtatggcgaagaaaaaaggctatttctttgatgcgttgcta
acctttaaagacagtgttatttcggaagcagcagataaaattagtgagtttataaaacaa
ttaaacaattggcgtgagctgtccattcgggagaacttaacttcattaatttggcaaatc
tatcaagaaaccaacttttatgaatttatcggtggtttgccaggtgggaaacagcgtcaa
gcaaacttgagagccttatacgacagagctaatcagtatgaaaaaacttctttcagggga
ctatttcgatttgtccgattcgttgagcgtttagaagttcgtggggatgatcttggaaca
gctaaaacgctaggtgaaaaagaagatgttgttcgtatgatgactatccacgcgagtaaa
ggactagaatttccggtggtaatagtatccgggctaagtaaaaaatttaatatgcgtgat
atttatagtaaaacattattagacaaagactatggttttgcatctgcttacagagatata
gaaaaaatgattgtatacccaactattatgcaacaggcaatgaagcaaaagaaaatgcgc
gaaatgatagctgaagaaatgcgtgtcctctatgtagcgctcactcgggcagaagaaaaa
ttaattttaactgctactgttcctgattttgaaaagacaagtaaacaatggctacaagtt
gcaaaagaaaaagaaaccattttaccggcagcaataagagcgaaggcaaagtgttatttg
gattggattggacatgcgctaattcgtcatattagttttaaagaattactttgtgaagag
gtcattcaaccacttccaactgatatgttgctccaaatagaaattaaaacaaaagaaatg
ttttggtcaagtgaagtaacagaaagtaaacaagacaatttgttggcaaaggtaagagct
catcaaccagtgcctgttcaaagcgcatataaggatgaaattgagcgatttatgaactac
cagtataaagatgaagcagcaactgaaattcgcgctaaacagtctgtaacggaattaaaa
cgacaatttaccttgcaggatagttggagtgacacgacgctattaaaagaatttcaaaaa
gtatcactggatagacccaaattcttgcaacaaaacaaattatctgcaacagaaataggt
acagccatgcatacactaatgcaggcggtttctctggaaaataaacctagtataaacgaa
gtgaggcaacttttacaaaagatgagagaaaaagacattttgacagaagcgcaagtcaag
gctattaatatagagcaaattcttggtttctttgaatcagaactaggcgaaaaagtactt
ctggaaaaagatcatgtgaagcgtgaagtaccatttagttatttgcttcctgtagctaaa
ctttacaaacaggcgaatatagatgaacatgtactcattcaaggggttgtcgatagtatg
attgatcaagaagattccatcattttaatcgattataaaacggataaaataactggaagg
tatgctgactgggacgcagcagaaaaagtaatgaaagatcgctatcaaatacaaatcaag
ctttacgcggaagcaattcaggcaataagtggaaaacgagtatccgaagcatacttatac
ttttttgatggacagcatatgtgccgaataaacacagaggaaggtttttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (16)   

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