KEGG   Leptospira interrogans serovar Lai 56601: LA_4331
Entry
LA_4331           CDS       T00098                                 
Symbol
dnaX
Name
(GenBank) DNA polymerase III gamma subunit
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
lil  Leptospira interrogans serovar Lai 56601
Pathway
lil03030  DNA replication
lil03430  Mismatch repair
lil03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lil00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LA_4331 (dnaX)
   03430 Mismatch repair
    LA_4331 (dnaX)
   03440 Homologous recombination
    LA_4331 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lil03032]
    LA_4331 (dnaX)
   03400 DNA repair and recombination proteins [BR:lil03400]
    LA_4331 (dnaX)
Enzymes [BR:lil01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LA_4331 (dnaX)
DNA replication proteins [BR:lil03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LA_4331 (dnaX)
DNA repair and recombination proteins [BR:lil03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LA_4331 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA AAA_22 AAA_5 RuvB_N TIP49 AAA_14 AAA_30 AAA_16 Rad17 AAA_18 ResIII AAA_7 AAA_19 DNA_pol3_gamma3 nSTAND3 Mg_chelatase RNA_helicase AAA_2 DEAD AAA_24 SKI ABC_tran AAA_28 TsaE RsgA_GTPase
Other DBs
NCBI-ProteinID: AAN51529
UniProt: Q8EY86
Position
I:4311190..4312629
AA seq 479 aa
MAGTHEVLSRKYRPQKFRDVIHQDLAIGALQNALKSGKIGHAYIFFGPRGVGKTTIARIL
AKRLNCQNPIDNEPCNECNSCSEITRGISSDVLEIDAASNRGIENIRELRDNVKFAPMGG
KYKVYIIDEVHMLTDQSFNALLKTLEEPPAHIVFVLATTEFHKIPETILSRCQDFIFKKV
PLSVLQDYSEKLCKIENVQYDQEGLFWVAKKGDGSVRDMLSFMEQAIVFTDSKLLGAAIR
KMIGYHGIEFLTSFIKSLVDPDNHSKSLEIIESLYQEGQDIYKFLWDSIEFTHTLNLIRD
SLADPESVNFPKEDLVKMKSDFENVDSSKLNFLSGKLFEIYERIKTIRLRNSFEIKVFTE
IQIKKLVEELTYPSLAGLIDKINHLILMVQGSKNVLSDVNQNTAFALKDTLQPETSKKKD
KLSSDVILESQFESNQQDSNLENTKPAELSSRKFDTSTEIKKKFLGTEVDPNQTPKLDS
NT seq 1440 nt   +upstreamnt  +downstreamnt
atggcaggaactcacgaagtcctttcccgaaaatatcgtcctcaaaaatttcgggacgta
attcatcaagaccttgctataggtgctcttcaaaacgctcttaaatctggaaagattggt
catgcgtatatattcttcggccctcgtggagttggtaaaaccacaatcgcaagaattctc
gcaaaacgtttaaactgtcaaaatcctatcgacaacgagccatgtaacgaatgcaattct
tgcagcgaaattactcgaggaatttccagcgacgttttagaaatagacgcagcaagtaac
cgaggaattgaaaacatccgcgaacttagagacaatgtgaagttcgctccgatgggcggg
aaatataaggtttatatcatagatgaagtccacatgcttacagaccaatcatttaacgca
cttttaaaaacattagaagaacctcctgctcatattgttttcgttttagctactacagag
tttcataaaattccagagacaattctttctagatgtcaggactttatttttaaaaaagtc
cctttgtccgttttacaagattattccgaaaaactttgtaaaatcgaaaatgttcaatac
gatcaggaaggtcttttctgggtcgccaaaaaaggagacggttccgtaagagacatgctt
tcatttatggaacaggccatcgtatttaccgactcaaaactgttaggcgctgcaattcgt
aaaatgataggttatcatggaatcgaatttttgacttcgtttatcaaaagtttagtcgat
ccagacaatcattctaaatccctggaaatcatcgaatctctttatcaagaaggccaggac
atctataaatttttatgggattccatagaatttactcacactctcaatttaattcgagat
tctcttgcagatcccgaatccgttaattttccaaaagaagatctcgtaaaaatgaaatcg
gatttcgagaatgtagattcttccaaattgaattttctttccggaaaactttttgagatc
tatgaaagaattaaaacgattcgtttgagaaactcttttgaaattaaagtttttactgaa
attcaaatcaaaaaactcgtagaagaacttacttatccaagtttggcgggtttaatcgat
aaaatcaaccacctgattcttatggttcaaggttctaaaaatgttttatcagatgtgaat
caaaataccgcttttgcacttaaagatacgttgcaaccggaaacttctaaaaaaaaagat
aaactttcttcagacgttattttagaatctcagtttgagtctaatcaacaggattctaat
ttagaaaacacaaaacctgccgaactaagttctcggaagtttgacacaagcactgagatt
aaaaaaaagtttttaggtacagaagtagacccaaaccaaactcctaaattggattcttaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (26)   
   Pfam (26)   
All databases (46)   

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