KEGG   Lawsonia intracellularis N343: LAW_01196
Entry
LAW_01196         CDS       T02437                                 
Symbol
sctC
Name
(GenBank) YscC/HrcC family type III secretion outer membrane protein
  KO
K03219  type III secretion protein C
Organism
lir  Lawsonia intracellularis N343
Pathway
lir03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:lir00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    LAW_01196 (sctC)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lir02044]
    LAW_01196 (sctC)
Secretion system [BR:lir02044]
 Type III secretion system
  Type III secretion core apparatus
   LAW_01196 (sctC)
SSDB
Motif
Pfam: Secretin Secretin_N T3S_SPI-1_N0
Other DBs
NCBI-ProteinID: AGC50591
Position
1422892..1424691
AA seq 599 aa
MWIQFDYYMKNALRVILKVLFYILLWSILFIHLVSVSKAETLFSYLYTHYSEQESLGSLL
TDFAFTQGYSAIISPAVRGNVSGFFKDENPYQFLEGMRSAFGVMWYMLGKTMYFYTQAEL
QRVFISPQVMTVERLYHILLNSSVISPQLPIQLNGDMIILSGPPHYIEQVLQAVSIFEVS
QLSNITMRVFPLKYASADDIVIQSMDKTVTVPGIASILRAMLNGQQETATTIVEQPATVN
KLNGEGLASKGKEKTEKGNEVKQQAAGVNIMADPRMNAVVINDAAYRMPYYEEVIHDLDK
PLELVEIHAAIVDIDSEFKRDLGFTLQQGSSKKSMTMGGDFSTTQQSLPLEITKGTVEGG
GLTYSTIYSKGVEFFLARVQALETEGEARVLGKPSVLTVDNIQATLENTSTYYIQVQGYQ
TVDLFKVESGTVLRVTPHIIYNNDGTKSIKLVVAIEDNQNDNSTDPTVGSNVVLPPIKQT
RINTQGVVNTGQSLLIGGYYYEQQGVNDKGIPILKDIPIIGYLFKTNTKTSKKMERLILI
TPRIIMPNTVTPIPAHVDDPSFHRSAVQDTYDDIKPKSSTGGGCSRKRRAPVIEEQRLG
NT seq 1800 nt   +upstreamnt  +downstreamnt
atgtggatacagtttgattattatatgaaaaatgctcttagagttattttgaaagtactc
ttttatatacttctatggagcattctttttatacacttagttagtgtaagcaaggctgaa
acacttttttcttatttatatacacattattcagaacaagaaagtttaggtagtcttttg
acagactttgcattcactcagggatatagtgctattatttcacctgctgttcgtggtaat
gtcagtggtttttttaaggatgagaatccataccagtttcttgaaggtatgaggagtgcc
tttggtgtcatgtggtatatgttaggaaaaaccatgtacttttatacacaggcagaactg
caaagagtgtttataagtccacaagttatgactgttgaacgcttatatcatatattatta
aactcttctgttatttcaccacagttacctattcaactaaatggagatatgattatcctt
tccggtcctccacattacattgaacaagtattacaggctgtatctatttttgaggtttct
caattatctaatattaccatgcgtgttttcccacttaaatatgcatctgcagatgatatt
gttattcaaagtatggataaaactgttacagttcctggtattgctagtattttacgtgca
atgcttaatggtcaacaagagacagcaacaacaatagttgaacagcctgcaactgtgaat
aagttaaacggagaaggacttgcttcaaagggtaaggaaaaaacagaaaaaggtaatgag
gtaaaacaacaagcagctggcgttaatattatggctgatcctcgtatgaatgctgttgtt
attaacgatgcggcatatagaatgccttactatgaggaagttattcatgatttggataaa
ccattagagcttgttgaaattcatgctgccatcgtagacattgattccgaatttaagaga
gaccttggttttacactacaacaaggaagttctaagaagagtatgacaatgggtggtgac
ttttctactactcaacaatcactaccacttgagattactaaaggaactgtcgaaggcgga
ggtctaacatattctaccatttattcaaaaggggtagagttctttttagcacgggtacaa
gctcttgaaacagaaggtgaagcaagagttttagggaaaccttcagtacttactgtagat
aatattcaagcaacattggaaaacacaagtacatactatattcaagttcaaggttatcag
actgttgatttattcaaagttgaatctggtacggttctacgtgtgacaccccatattata
tataataatgatggtacaaaatctattaaacttgttgtagctatcgaagataatcaaaat
gataattcaacagatcctactgtaggttctaatgttgtactaccacctattaaacagaca
agaattaatactcaaggtgttgttaatactggccaaagtttacttataggtggatattac
tatgaacaacaaggtgttaatgataagggtatacctattctcaaggacatccctattata
ggatatttatttaaaacaaatacaaaaacatcaaaaaagatggaacggctaatacttatt
accccaagaattataatgcctaatacagttacgcctatacctgcacatgttgatgatcct
tcatttcatcgtagtgcagtacaggacacatatgatgatataaaacccaaaagttctaca
ggaggagggtgctctagaaaaagaagggctccagttattgaagagcagaggctaggctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (1)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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