KEGG   Leptospira interrogans serovar Linhai: LIL_11916
Entry
LIL_11916         CDS       T03859                                 
Symbol
ssl2
Name
(GenBank) DNA or RNA helicase
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
lis  Leptospira interrogans serovar Linhai
Pathway
lis03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lis00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    LIL_11916 (ssl2)
  09124 Replication and repair
   03420 Nucleotide excision repair
    LIL_11916 (ssl2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lis03021]
    LIL_11916 (ssl2)
   03400 DNA repair and recombination proteins [BR:lis03400]
    LIL_11916 (ssl2)
Enzymes [BR:lis01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LIL_11916 (ssl2)
Transcription machinery [BR:lis03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     LIL_11916 (ssl2)
DNA repair and recombination proteins [BR:lis03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     LIL_11916 (ssl2)
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C SNF2-rel_dom
Other DBs
NCBI-ProteinID: AJR14518
Position
1:complement(2261238..2262947)
AA seq 569 aa
MSKPLIVQSDRTMLLEVDNPEFEACQSVVSKFAELEKSPEYLHTYRISPLSLWNAASIKM
SADEIVECLEKFSRYSVPKNIVNEIREQISRYGKVKLVKEESGELAILSNEKGFLQEIGN
HRAVQPFIESTFPDKIYIKKEYRGHIKQALIKIGFPVEDLAGYDEGNKYGFNLRPTSISG
KKFGMRDYQRACVEVFHAGGGNEGGSGVVVLPCGAGKTIVGIGVMQIVGAETLILVTNTL
SIRQWRNEILDKTDIPPEDIGEYSGEVKEIRPITIATYNILTHRKKKGGDFTHFHLFGAN
NWGLIVYDEVHLLPAPVFRMTSELQAKRRLGLTATLVREDGLEEDVFSLIGPKKYDVPWK
ELESKSWIAEAKCKEIRVNMEDDLRLKYSIADDREKFRLASENPEKMKAIGLIMKKHSES
HLLVIGQYINQLEEISKKFNIPLITGKTPLPERQTLYDAFRSGKIKSLVVSKVANFSIDL
PDANIAIQVSGTFGSRQEEAQRLGRILRPKGHDNTAVFYSLISRDTNEERFGQNRQLFLT
EQGYEYEIYTLDQFREAQEELAQLQLNNV
NT seq 1710 nt   +upstreamnt  +downstreamnt
atgagtaaacccttaatcgttcagagcgacagaaccatgcttttagaggtggataatccg
gaatttgaagcctgtcaaagtgtagtttccaaatttgctgaattggaaaaaagtccggaa
taccttcacacatatagaatttccccactttccctttggaacgccgcatcaatcaaaatg
tctgcggatgaaattgttgaatgtttggaaaaattctctaggtattctgttcccaaaaac
atagtcaacgaaatccgagagcagatcagtcggtacgggaaggtaaaacttgttaaagaa
gaatccggggaactcgcaattctatccaatgaaaaaggatttttacaagaaattggaaat
catagagccgttcaaccgtttatagaatctactttcccagataagatatatatcaaaaaa
gaatatcgtggtcatatcaaacaagctttgatcaagattggttttccagttgaagacctg
gccggttatgacgagggaaataaatacggatttaatttaagacctacgagcatcagtggc
aaaaaatttggaatgcgggattatcagagagcttgtgtggaagtatttcacgccggcgga
ggaaacgaaggtggttctggagttgtagtactcccctgtggcgctggaaaaaccatcgta
ggaatcggagtaatgcaaattgtaggtgctgaaactttgattttagtcacaaacacactt
tctattcgtcaatggagaaatgaaattctggataaaacggacattcctcctgaagatata
ggagaatattctggcgaagtcaaagaaattcgtcctattacaattgctacatacaacatt
ctcactcatagaaagaaaaaaggcggagattttacccactttcatttattcggagccaat
aattggggattgatcgtttacgacgaggtacatttacttcctgcccctgtgtttagaatg
acttccgaacttcaggcaaaaagaagactcggtttgactgctactttggtaagagaagac
ggtttagaagaagacgtattctctctgattggacctaaaaaatacgacgttccttggaaa
gagttagaaagtaaatcttggattgcagaagcaaaatgtaaggaaattcgagttaatatg
gaagacgatcttcgtctgaaatattccattgcggacgatagagaaaagtttagactggct
tctgaaaatccagaaaagatgaaggcgattggtctcattatgaaaaaacattccgagtct
catttgttagtaattggacagtatatcaatcaattggaagaaatatcaaagaaatttaat
attcctttgattaccggtaaaacccctcttccggaaagacaaacattgtatgacgcgttc
cgttccggtaaaatcaaatctcttgtagtgagtaaagtggcgaacttttcaatcgacttg
ccagatgcaaatattgcgatccaggtttctggtacttttggttccagacaagaagaagca
cagagattaggtcgtattttgagacctaaaggtcacgataatactgccgtattttattct
cttatatccagagatacaaacgaagaacgttttggacaaaatcgtcagttgtttcttaca
gaacaaggatatgaatacgagatttataccttggaccagtttagggaagctcaagaagaa
ttggctcagttacaattgaataatgtctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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