KEGG   Lotus japonicus: Lj2g3v0933930.1
Entry
Lj2g3v0933930.1   CDS       T04348                                 
Symbol
Lj2g3v0933930.1
Name
(Kazusa) -
  KO
K13192  RNA-binding protein 26
Organism
lja  Lotus japonicus
Brite
KEGG Orthology (KO) [BR:lja00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:lja01009]
    Lj2g3v0933930.1 (Lj2g3v0933930.1)
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lja03019]
    Lj2g3v0933930.1 (Lj2g3v0933930.1)
   03041 Spliceosome [BR:lja03041]
    Lj2g3v0933930.1 (Lj2g3v0933930.1)
Protein phosphatases and associated proteins [BR:lja01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     Lj2g3v0933930.1 (Lj2g3v0933930.1)
Messenger RNA biogenesis [BR:lja03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Negative regulators of mRNA 3' end processing
     Lj2g3v0933930.1 (Lj2g3v0933930.1)
Spliceosome [BR:lja03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    Lj2g3v0933930.1 (Lj2g3v0933930.1)
SSDB
Motif
Pfam: RRM_1 Nup35_RRM_2 RRM_3 Nup35_RRM zf_CCCH_4 zf-CCCH RNase_Y_N
AA seq 916 aa
MELKVSSPKLESVAPSDCLSDPEEKEVSDDDDDDRNHKHRRRDDRSQSLERDVSDPVISR
PFRKRNKNFGNRPPFKGNESLSFETLKAYGDAATDKEFYSKFERRRPGFTPGPRTPLDMS
QRLRTNQSFTVDPGAGRGRGRESGFWNQRESRLSSMDVASQIVQQRSIPSSLYTGRGLPN
VSNAQNASWNTFGLIPAVPNGGMDMLHPLGLQGTLRQPMNSSLNVNIPRQRCRDFEERGY
CLRGDMCPMEHGVNRIVIEDVQGLSQFNLPVSLPSAPLIGAPAGSGSHHSVNASTTSVNS
KCIPGKKSVVGDDGMPVDSAYPGLGCTSGADLYDPDQPLWNNSGLESSNALLSIQSSKID
ETELISSEALNSDYPVGTTRTSVNLQGSSSSVWARMNSSRNRFDMKEKTNSMISSFHYPQ
NQLKEDNDELVGSRSTSCQGKQIIADDTDPRSMETLLKAQAFNMRNIRKPSQKALCTLFV
SGIPQRSNKRETLLTHFKKFGEVIDIHIPMNSDRAFVQFSKREEAEAALKSPDAVMGNRF
IKLFWANRDCVRNDCTASGNGVIVTPRGQAPAFVPSHPVVTDRRKDIHQTDASKTIFEVP
SPSDQPKHIIAGGPKAPPPSQKKYENLEHLKEELRKKQEMLDQKRNEFKRQLSKLEKQAT
GLKGEIVTEHAAKRPKTSMTTDVAKLTSPQSSDADPGMTSLHAEATTDRNKQLVSTVSQS
PKASTTMRVLEPTGLNQPIQPFVPVNRYKLDNRPTAFRIITPLPDGLANVASLKEHFLPY
GELSSVELVDVQVDDSSQQEAHINFTTRRAAERAFINGKCWKDHNLEFMWLASANSSNAT
GSREPSLSAPKEPLDRDDHSEEKLGNAVNQEAAVSDGERKNSENENGLKVMEMEPGEDLQ
CSPRQVSSAKQSPEGN
NT seq 2748 nt   +upstreamnt  +downstreamnt
atggagctgaaagtttcatctccaaaactagagtctgttgcaccttctgattgtctcagt
gatcccgaggaaaaggaagtgagtgatgacgatgatgatgatcggaatcataagcatcgg
aggcgggatgatcgttctcagtctttggagagagatgtttcagatcctgttattagcagg
ccattcaggaagcgcaacaagaattttggaaatcggcctccgtttaagggaaatgagtct
ctatcctttgaaacactgaaagcttatggcgatgccgctacagataaagagttctactcc
aagtttgagagaaggcgtcctggctttactccaggtcctcgaacacctttagatatgagt
caaagactacggacaaaccaatcatttactgtagatccaggtgctggcaggggaagaggc
agagaatctggtttctggaatcaacgtgaatctaggttgagctcaatggatgttgcttca
caaatagttcagcagcggtccattccttcaagtctttatactggacggggattaccaaat
gtttcaaatgcacaaaatgcatcctggaacacatttggtttaattccagcagtacccaat
gggggcatggatatgcttcatccattgggtttacagggaactctcagacaacccatgaat
tcatctttaaatgtgaatattcctcgtcaacgatgtagagattttgaggaacgtggatat
tgcctcagaggggacatgtgccccatggaacacggtgttaatcggattgtcattgaagat
gttcagggtctttcacagttcaaccttcccgtgtctcttccaagtgcgcccctaatcgga
gctcctgctggatctggatctcatcattcagtaaatgcttcaaccacttcagtgaacagc
aaatgtatacctggaaaaaaatctgtagttggtgatgatggtatgcctgtggatagtgca
tatcctggtcttggttgcacaagtggagctgatctctacgatcctgatcaaccactttgg
aacaatagtggtctggagtcttcaaatgcactcctatctattcagtcatccaagattgat
gaaactgagctcatatctagcgaggctctaaatagtgattatccagttggaactaccaga
acttctgtcaatttgcagggttctagttcatctgtctgggccagaatgaatagttcaaga
aacagatttgacatgaaagaaaaaactaactctatgataagttcttttcattatcctcag
aatcaactgaaggaagataatgatgaattagttggctcccgcagtacttcctgtcaagga
aagcaaatcatagcagatgatactgaccccagaagcatggaaacattattgaaggcacag
gcttttaatatgcgtaacatacgcaaaccatcccaaaaggcattgtgtactctatttgta
agtgggatacctcagagaagtaacaagagggagactcttcttactcattttaagaagttt
ggggaagttattgatattcatattccaatgaacagtgatcgagcatttgtccaattctcc
aaaagggaagaggctgaagctgctttgaaatcaccggatgctgtaatgggcaatcgtttt
atcaagctattttgggctaaccgtgattgtgttcgcaatgattgtactgctagtgggaat
ggtgtaattgttactccccgtgggcaagcacctgcttttgttccatctcatccagtcgtc
actgataggcgaaaagatatccatcaaactgatgcttcaaagactatatttgaagtacca
tctccttctgatcaacctaagcatatcattgcaggtggacccaaggctccacctccttcg
caaaagaagtatgaaaacttagaacatctaaaggaagaactgcgtaagaagcaggaaatg
ttggaccaaaagcgtaatgagttcaagcgccagctgagcaaacttgagaaacaagctaca
ggactcaagggtgaaatagttaccgaacatgctgcaaagagacccaaaacaagcatgacg
actgatgttgccaaactcacttctcctcaatcgtctgatgctgatcctggaatgacatct
ctacatgcagaggcaacaactgataggaataaacagttggtcagtactgtatcccaaagt
cctaaagcaagtacaacaatgagagtgctagaacctacaggcttgaaccagccaattcaa
ccatttgtgcctgtaaataggtacaaattggacaatcgtcccactgcatttagaatcatc
actcctttgccagatggtctagcaaatgttgcttctttgaaggaacacttcttaccatat
ggagaactttcttctgtagagctagtagatgtgcaagtcgatgatagtagtcaacaagag
gcacatataaatttcactactcgccgtgcagctgagagggcgtttattaatggtaaatgc
tggaaggaccacaatctggaattcatgtggctggcttccgctaattctagcaatgcaact
ggtagtagagaaccttctctatccgctcccaaggagcccttagatagagatgaccattct
gaagaaaaattgggaaatgcggtaaaccaagaagcagctgtatcagatggtgagcgtaaa
aattctgaaaatgaaaatggtttgaaggttatggaaatggaaccaggtgaagatctccag
tgttccccaaggcaagtttcttctgccaaacaatcaccagagggcaat

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

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