KEGG   Lotus japonicus: Lj5g3v1494610.2
Entry
Lj5g3v1494610.2   CDS       T04348                                 
Symbol
Lj5g3v1494610.2
Name
(Kazusa) -
  KO
K01875  seryl-tRNA synthetase [EC:6.1.1.11]
Organism
lja  Lotus japonicus
Pathway
lja00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Lj5g3v1494610.2 (Lj5g3v1494610.2)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:lja01007]
    Lj5g3v1494610.2 (Lj5g3v1494610.2)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lja03016]
    Lj5g3v1494610.2 (Lj5g3v1494610.2)
Enzymes [BR:lja01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.11  serine---tRNA ligase
     Lj5g3v1494610.2 (Lj5g3v1494610.2)
Amino acid related enzymes [BR:lja01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   Lj5g3v1494610.2 (Lj5g3v1494610.2)
Transfer RNA biogenesis [BR:lja03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    Lj5g3v1494610.2 (Lj5g3v1494610.2)
 Prokaryotic type
    Lj5g3v1494610.2 (Lj5g3v1494610.2)
SSDB
Motif
Pfam: tRNA-synt_2b Seryl_tRNA_N TMF_TATA_bd DUF3450 COG2 Nucleocap_ssRNA Syntaxin TPR_MLP1_2 CENP-F_leu_zip Mis12 FapA Occludin_ELL
AA seq 477 aa
MLDINLFREEKGHNPEIIRESQRRRFASVEVVDEVIDLDKEWRKRQFELENLRREFNKIN
KEVSKLKRAGEDATKLISESEETKKSIAEKEAEVRDTLKLLNSKLETIGNLVHDSVPISN
DEANNAVVRSWGEKREEPKLKNHVDLVELLEIADTKKGADVAGGRGFYLKGDGVRLNQAM
INFGLDFMEKRGYTLLHTPFFMRKEIMSKCAQLAQFDEELYKVTGEGDDKYLIATAEQPL
CAYHLDDWIHPSQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCLTSPNDND
SWDMHEEMLKNSEDFYKELNIPYRVVSIVSGALNDAAAKKYDLEAWFPASQAYRELVSCS
NCTDYQARRLEIRYGQRKSNEQLKQYVHLLNSTLTATERTICCILENNQKDDGVEIPEAL
RPYMGGKSFIPFKNQPEAKGKKSKALKHVQFNPAANILTSITKFIGKSNVIRKIGTR
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgttggatatcaacctgttccgggaagagaagggccacaaccctgaaatcatccgcgaa
tctcaacgccgccgtttcgcctccgtcgaggtcgtcgacgaggtcatcgatctcgacaaa
gaatggcgaaagcgtcaattcgagttggagaatctgcgcagagagttcaacaagatcaac
aaggaagtctccaaactcaagcgtgctggtgaagatgcaaccaagttgattagtgaatca
gaggagactaagaaatcgatagcggagaaggaggctgaggttcgggacacgctgaagctt
ctgaattccaaattggaaacgattgggaacctcgtccatgactcggttcctatcagcaat
gatgaggctaacaatgctgtggttagatcgtggggcgagaaaagagaggagcctaaactg
aagaatcatgtggatctggttgagcttcttgagatagcagatacaaagaaaggagctgat
gttgctggaggtagaggtttctatctcaaaggagatggtgttcgtcttaatcaagctatg
atcaactttgggcttgattttatggagaaaaggggatataccttgttacacactcctttc
ttcatgagaaaagaaattatgtctaagtgtgctcagttagcccaatttgatgaagaactt
tataaggtaactggtgaaggagatgacaaatatctgattgccacagcagagcaaccactt
tgtgcctatcatttggatgattggatccacccttcccagctacccataagatatgctgga
tattcatcttgcttccgtaaagaagctggatctcatggtcgagataccctaggaattttc
cgagttcaccaatttgagaaagtggagcagttttgccttactagccccaatgacaatgat
tcatgggatatgcacgaggaaatgctaaagaactccgaggacttctacaaggagttaaac
attccatatcgagttgtttccattgtatctggtgctctgaatgatgctgcggcaaagaag
tatgatctagaagcatggtttccagcttctcaagcttacagagagcttgtgtcctgttca
aactgcacagactatcaggccagaaggctagaaattcgatatggacagaggaagagcaat
gagcagttgaagcagtatgttcacttgttgaactctacactcacggctactgagaggacc
atttgctgcatactagagaacaaccagaaggatgacggagtggagattccagaagccctt
aggccgtacatgggtggaaagtctttcatacctttcaagaaccaacctgaagcaaaaggg
aagaaatcgaaggcattgaaacatgttcaatttaatcctgctgctaatattctaacttca
attacaaaattcattggaaagagcaatgtcatccgcaaaattgggactaga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
Protein domain (12)   
   Pfam (12)   
All databases (31)   

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