KEGG   Lotus japonicus: Lj6g3v1691350.1
Entry
Lj6g3v1691350.1   CDS       T04348                                 
Symbol
Lj6g3v1691350.1
Name
(Kazusa) -
  KO
K03139  transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
lja  Lotus japonicus
Pathway
lja03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Lj6g3v1691350.1 (Lj6g3v1691350.1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lja03021]
    Lj6g3v1691350.1 (Lj6g3v1691350.1)
Transcription machinery [BR:lja03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIF
     Lj6g3v1691350.1 (Lj6g3v1691350.1)
SSDB
Motif
Pfam: TFIIF_beta TFIIF_beta_N Tau95
AA seq 241 aa
MDEEKSERSVWLMKCPVVVAKSWQNHHPSPSQPLSKVVLSLDPLLPEDDPSHLQFTMEMT
GSEAVNMPKTYALNMFKDFVPMCVFSETSQGGKVAMEGKVEHKFDMKPHGENIEEYGKLC
RERTNKSMIKNRQIQVIDNDRGVLMRPMPGMIGLVSSNSKDKKRTQPVKQSDTKRTRRDR
GELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRGANQGTYELKPEYK
K
NT seq 723 nt   +upstreamnt  +downstreamnt
atggatgaggagaaaagtgagagatcggtgtggctgatgaagtgccctgtcgtggtagct
aaatcatggcagaatcatcacccttctccttcacaacctctttccaaagtcgttctttct
cttgatcctctcctccccgaagatgacccttcccatctccagtttacaatggagatgact
ggctctgaagctgttaatatgccaaaaacttatgctttgaatatgtttaaagacttcgtt
cctatgtgcgtcttctctgaaacaagccaaggtggcaaggttgcaatggaagggaaagta
gaacataagtttgatatgaagccccacggtgaaaacattgaagaatatggcaaattgtgc
cgcgagaggacaaacaaatctatgattaaaaatcgacagatacaggttattgataatgat
cgtggagttctaatgaggccaatgcccggaatgattggtctagtttcatccaattcgaag
gacaagaagaggacacagccagttaagcaatctgatacaaagagaacaagaagagatcgt
ggagagttggaggatataatgttcaagctatttgaaagacagcctaactgggccttgaag
cagcttgtccaagagactgatcaacctgcacaattcttgaaagagatcctgaatgaattg
tgcgtgtacaataaaagaggtgccaaccaaggaacttacgagctgaaacccgaatacaag
aaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (9)   

Download RDF
DBGET integrated database retrieval system