KEGG   Lactobacillus johnsonii FI9785: FI9785_1234
Entry
FI9785_1234       CDS       T01120                                 
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
  KO
K01925  UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
Organism
ljf  Lactobacillus johnsonii FI9785
Pathway
ljf00470  D-Amino acid metabolism
ljf00550  Peptidoglycan biosynthesis
ljf01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ljf00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    FI9785_1234 (murD)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    FI9785_1234 (murD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:ljf01011]
    FI9785_1234 (murD)
Enzymes [BR:ljf01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.9  UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
     FI9785_1234 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:ljf01011]
 Precursor biosynthesis
  Amino acid ligase
   FI9785_1234 (murD)
SSDB
Motif
Pfam: Mur_ligase_M MurD-like_N Mur_ligase_C 2-Hacid_dh_C TrkA_N AlaDh_PNT_C
Other DBs
NCBI-ProteinID: CAX67095
UniProt: D0R4T2
Position
complement(1160761..1162143)
AA seq 460 aa
MKKIKTYENKNILILGLGKSGFSVAKLLLKLGAKLTLNDKKDLSNDDRAAELDKLGVRVI
SGYHPVEIFDEEKFDYLVKNPGIPYENPMVEKAEKLDIPVITEPEIALNVSEAPYVCVTG
SNGKTTTVMLTQRIMDHHLSKNGGHAYAVGNIGVPISEVVEKATSKDLLVVEMSSFQLLG
VTDIKPKVAAIVDIYNNVHLDYHKTFDNYVEAKLRITQSQDQDDYFIANFDQKNILEKEL
DKTKAKVQTFSETDKTADYFIGDEYLESKDDHHIMKISDIKIPGIHNQQNCLVAIAISKL
MSADDSDIQYALSTFTGATHRLQYVMTYNDRKIYNDSKSTNIEAATVAIPSFKEPEVLIA
GGLDRGFMFDSLVPLFKKHVKSIVLYGETKYLLADAARKAGIKNIVIVNTLQEAVPRAYE
LSEAGDIILFSPACASWDQFNTFEERGDFFVKFIKELKTK
NT seq 1383 nt   +upstreamnt  +downstreamnt
atgaaaaaaattaagacatacgaaaataaaaatattttgattttaggcttaggaaagagt
ggtttttccgttgctaaacttcttttgaagcttggcgctaagctaactttaaatgataaa
aaagatttatctaatgatgatcgtgctgctgaattagataagttaggagttagagttatt
tctggataccatccagtagagatttttgatgaggaaaaatttgattatcttgttaaaaac
cctggaattccttatgaaaatccaatggtagagaaggccgaaaaattagatattccagtt
attactgagcctgaaattgcacttaatgttagtgaagcaccatacgtttgtgttactggc
tcaaatggaaagacaactacggtcatgcttacccaaagaattatggatcatcatttatct
aaaaatggtggtcatgcttatgcagttggtaatattggtgttccaatttcagaagtagtt
gaaaaagcaacttctaaagatctcctagtagtagaaatgtctagtttccaattacttggg
gtaactgatattaagcctaaagtagctgccattgttgatatttataataatgttcacctt
gactaccataagacttttgacaattatgttgaagctaagcttagaattactcaatctcaa
gatcaagatgattattttattgctaactttgatcaaaagaatattttagaaaaagagctt
gataagacaaaagctaaggttcagacattttcggaaacagataaaactgccgactatttt
attggtgatgaatatcttgaaagcaaagacgatcatcacattatgaagatcagcgatatc
aagatcccaggtattcataaccaacaaaattgtttagtagccattgccatttctaaatta
atgagtgcagatgatagtgacattcaatatgcattaagtacttttactggtgcaactcac
cgtttgcaatatgtaatgacttataatgatcgtaaaatttataacgattcaaaatcaacg
aatattgaagctgctactgtagctattccatcatttaaagagccggaagttttgattgcg
ggtggattagatcgtggatttatgtttgattcactagttccattatttaaaaagcatgta
aaatcaattgtactttatggcgaaactaaatatcttttagctgatgctgctcgtaaagcg
ggtattaaaaatattgtaattgttaatactttacaagaagctgttccgcgagcatatgaa
ttaagtgaagcaggagatattattttgttttcaccagcatgtgcatcttgggatcaattt
aacacttttgaagaacgtggagacttttttgtaaaatttattaaggaattaaagactaaa
taa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (25)   

Download RDF
DBGET integrated database retrieval system