KEGG   Lactobacillus johnsonii FI9785: FI9785_982
Entry
FI9785_982        CDS       T01120                                 
Symbol
nth
Name
(GenBank) endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
ljf  Lactobacillus johnsonii FI9785
Pathway
ljf03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ljf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    FI9785_982 (nth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ljf03400]
    FI9785_982 (nth)
Enzymes [BR:ljf01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     FI9785_982 (nth)
DNA repair and recombination proteins [BR:ljf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     FI9785_982 (nth)
 Prokaryotic type
     FI9785_982 (nth)
SSDB
Motif
Pfam: HhH-GPD HHH HHH_5 DUF4294 Q_salvage KMP11 RecR_HhH Transposase_20
Other DBs
NCBI-ProteinID: CAX66849
UniProt: D0R436
Position
896883..897512
AA seq 209 aa
MEELLSDDEARLVLKRILSLYPDAKGELNWDTKFHLLCAVLMSAQTTDKMVNRTTPKFFK
DYPDSATLAQANIEDIENHIRTIGLYRTKAKHLKETAQIITEKFDGQIPKDKKILMTLPG
VGEKTANVVLAEGFKVPAIAVDTHVSRISKRFNIVSAKATPHEVEKRLEELLPKEEWIHT
HHAMILFGRYTMPARTKNQDPYSFLPPLN
NT seq 630 nt   +upstreamnt  +downstreamnt
atggaagaattattatcagacgatgaagcacggttggttttaaaaagaattctttcttta
tatccagatgctaaaggagaattgaattgggacacaaagtttcacctattatgtgctgtt
ttaatgagtgcccagaccaccgataaaatggttaatagaactacacctaaattctttaag
gactatccagatagtgccactttggcccaagcaaatattgaagatattgaaaatcacatt
cgtacaattggtttatatcgtacaaaagctaagcatttaaaagagacagcacaaattatt
accgaaaaatttgatggtcagattccaaaagacaaaaagattttgatgaccttacctggc
gtgggggaaaagacagctaatgttgttttagcagaaggcttcaaagtaccagcaattgca
gtagatacacatgtatctcgtatttctaaaagatttaatatcgttagtgcaaaagcgact
cctcatgaagtagagaagcggcttgaagaattgcttccaaaagaagaatggattcatact
catcatgctatgattttattcggcagatatacaatgcccgctcggactaaaaatcaagat
ccatattctttcttaccaccgttaaactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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