KEGG   Lactobacillus johnsonii NCC 533: LJ_0609
Entry
LJ_0609           CDS       T00158                                 
Name
(GenBank) exodeoxyribonuclease A
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
ljo  Lactobacillus johnsonii NCC 533
Pathway
ljo03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ljo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    LJ_0609
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ljo03400]
    LJ_0609
Enzymes [BR:ljo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     LJ_0609
DNA repair and recombination proteins [BR:ljo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     LJ_0609
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2 COMM_domain
Other DBs
NCBI-ProteinID: AAS09612
UniProt: Q74HS8
Position
complement(1768093..1768878)
AA seq 261 aa
MMERRIIMKFMSWNVNGLRAALRHGFVNTFTDLDADIFGIQDTRVEPNEVKIDLPGYYQY
WNYAERKGYAGTAVFTKEKPITVANGFGVPEVDGEGRSITLEFSNFYFINVQVPFSGEKL
QRLDFRELWAQTFRNYVTKLMQYKPVIIGGDMSVAHERIDLAEPDDNHHRPGFTGIERKE
FSELLNAGFIDTFRYFHPDEAKYTYWSYRDKEARAENLGWRLDYFLVSNNLEDRLTNAKI
LSNIMGSDHCPIELDVDITTR
NT seq 786 nt   +upstreamnt  +downstreamnt
gtgatggaaagaagaattattatgaaatttatgtcttggaatgtaaatggtttacgggct
gctttacgtcatggctttgttaacacgtttactgatttagatgcagatatttttggaata
caagatactcgtgttgagccaaatgaagtaaaaattgatttaccaggatattatcaatat
tggaattatgctgaaagaaaaggctatgccggcactgcagtatttacaaaagaaaaacca
attactgtggctaatggcttcggtgttccagaagttgatggtgaaggaagaagcattact
ttagagttttcaaacttttactttattaatgttcaagtaccattttcaggagaaaagctt
caaagattagacttcagagaattatgggcacagacttttagaaattacgttactaaatta
atgcaatacaagccagtaattattggcggagatatgagtgttgctcatgagagaatcgat
ttagctgaaccagatgataaccaccaccgtccaggatttactggtattgaaagaaaagaa
ttttctgaattgttaaatgctggttttattgatactttccgttacttccacccagatgaa
gctaagtatacttattggagctatcgtgataaggaagctcgggcagaaaatcttggctgg
agactagattacttcctagtatcgaataatttggaagatagattaactaatgctaagatt
ttaagtaacattatgggatcagatcactgtccaattgaattggatgtagacattactact
agataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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