KEGG   Leuconostoc kimchii: LKI_06400
Entry
LKI_06400         CDS       T01233                                 
Name
(GenBank) DNA helicase (putative)
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
lki  Leuconostoc kimchii
Pathway
lki03420  Nucleotide excision repair
lki03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lki00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    LKI_06400
   03430 Mismatch repair
    LKI_06400
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lki03400]
    LKI_06400
Enzymes [BR:lki01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LKI_06400
DNA repair and recombination proteins [BR:lki03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LKI_06400
   MMR (mismatch excision repair)
    Other MMR factors
     LKI_06400
SSDB
Motif
Pfam: UvrD-helicase UvrD_C_2 UvrD_C AAA_19 Viral_helicase1 DEAD AAA_30 PhoH AAA_16 NACHT SLFN-g3_helicase Ribosomal_60s NB-ARC
Other DBs
NCBI-ProteinID: ADG40820
UniProt: D5T3H1
Position
1246477..1248840
AA seq 787 aa
MDNQIKIDETQYLDGTLQAMEKSLVATAAEIKQTNKSIDSVAQNWSDVRLKTDTYSGIVE
TAASIRQQQQMLSERENSKTRAERRVATLTKQIEKPYFARIDFSETTSQDREAETIYIGL
GSFSNDKNQFLVYDWRAPVASIYYDGGIGKVSYLTPDGTQQANVTLKRQFQIEDGVIVTL
FDTEEAIGDAMLMNALSGESSTKMKSIVTTIQKEQNKIIRNTEADLLFVQGAAGSGKTAA
VLQRVAYLLYRYRGKLTSGQVVLFSPNQLFNDYIDNVLPELGEQNMVQMTFYQYASRRLP
KIAVETLQERFEHDKTADNINRAKGSLAMFHAVTAYAEHLNQTDMKIRNLMFRGEPLISK
ARISEIYYQYNENYKLGQRLEATRDTLMRILSAHIGQELRKDWVELAIENLSKQEYDELV
GAGQVRVGDNEESDAAARTRQVQLGEGPKEREFASEKAERHFLAKQIVTQSLKPLARQIR
RANFLNINAQFIDFLRHAHHYFDLKAFNITETGWLAHVETIITALKQKQLSLTDTTLYLY
LYDLMTGKKGERDIRFLFIDEIQDYTPFQLAFLKFSFPKAKFTVLGDLNQAIFTKDNATR
LQDDFSSLFDPERIEQVKLTQTYRSTQQITDFTKYILRDGQDIDAFNRDGDKPMVYTLLS
ESDMLVKLQQQLTQHTLNHDTTAIITKTRDDAQQLAAQLDSQSVTLIQSENQRLAKGAII
VPSYLAKGLEFDAVIIWHADNTRYGDDSERRLLYTVASRAMHTLTLLAEKRATQLLDDVP
AHLYEVN
NT seq 2364 nt   +upstreamnt  +downstreamnt
ttggacaatcaaattaaaattgacgaaacgcagtaccttgatggaacactacaggcgatg
gaaaaatcgcttgtggcaaccgcagcggaaattaaacaaacaaacaaaagtatcgactcc
gttgcacaaaattggagcgacgtgcgattaaaaacggatacctattcaggcattgttgaa
acggcagcgtcaattcgtcagcagcagcaaatgttatctgagcgtgaaaactctaaaacg
cgtgcagagcgtcgtgtggcgacattaacgaaacaaattgaaaagccttatttcgcaaga
attgactttagtgaaaccactagtcaagatcgcgaagcggaaacaatttatattgggttg
ggatcatttagtaacgataaaaatcagtttttagtctatgattggcgcgctccggttgct
tcaatctattatgatggtggcattggaaaagtatcctatttgacaccggacggtacgcaa
caggcaaatgtcacgcttaaaagacaattccaaattgaagatggtgtcattgtgacacta
tttgatacagaagaagctattggcgatgcgatgttgatgaatgccttatcaggtgaatca
tcaaccaagatgaagtcaattgtgacaacgattcaaaaagaacaaaataaaattattcgt
aatacagaagctgatttattatttgttcaaggcgcagcaggttcaggtaaaacagctgct
gtactacagcgtgtagcttatttattatatcgttatcggggtaaactaacttctggtcaa
gtcgttttatttagtccaaatcaattatttaatgattatattgataatgtgttaccagag
ctgggtgaacaaaatatggtacagatgacattttatcaatatgcttcacgtcgtttgcca
aaaatagctgttgaaacgttacaagaaagatttgagcatgacaagactgccgacaacatt
aatcgtgcaaagggcagtttggctatgtttcatgcggtaactgcttacgcagaacatttg
aatcaaacggacatgaaaattcgaaatctcatgttccgtggcgagcccctaatttctaaa
gcacgtatttcagaaatctattaccaatacaatgaaaattataaattaggtcaacgatta
gaggcaacgcgtgatacattgatgcggatattgagcgcgcatattggtcaggaattgcgt
aaagattgggtagaattagccattgaaaatctttccaagcaagaatatgatgaactggtt
ggtgctggtcaagtgcgtgttggtgataatgaagaatctgatgcagccgcgcgtacacga
caagtccaactaggagagggaccaaaagaacgtgaatttgccagtgaaaaagcagaacgc
cattttcttgcaaaacaaattgtgacccagtcgttaaaaccgctagcacgtcaaatccgt
cgtgcaaattttctaaatattaatgcgcaatttattgattttttgcgtcatgcccaccat
tattttgatttaaaagcgtttaacataacagaaactggttggttagcgcatgtcgaaaca
attattacggcattgaaacagaagcaattatcgttgacggatacaacgctatatttatac
ctatacgatctgatgactggtaagaaaggtgagcgtgatattcgttttctgtttattgac
gagattcaggattacacaccatttcaattggcatttttgaaatttagtttcccaaaggca
aaatttaccgtgttgggtgatctcaaccaagctatttttacaaaagataatgcaacgcgt
ttgcaggatgatttttcatcgttgtttgaccctgaacgcatcgagcaggttaaattgaca
caaacttatcgttcaacacaacaaataacagatttcacaaaatatattttacgtgatgga
caggatattgatgcgtttaatcgtgatggtgacaaaccgatggtatatacgttattaagc
gaatcagacatgttggttaaactacagcaacaattaacgcaacatacgttaaaccatgat
acgacagcaattattacgaagacacgtgatgatgcgcaacaattagctgcgcaacttgac
agtcaatcagtcacattaattcagtcggaaaaccaacgcctagccaagggcgcgatcatt
gtgccctcttatttagcaaaggggttggaatttgatgctgtgattatttggcatgctgac
aatacacgttacggggatgattcagaacgacgcttgctatatacagtagctagtcgtgcc
atgcatacattgacgttattagctgaaaaacgtgcaacgcaattacttgatgatgtgcca
gcacacttatatgaggtaaactaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (24)   

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