KEGG   Apilactobacillus kunkeei: APS55_07420
Entry
APS55_07420       CDS       T04112                                 
Name
(GenBank) DNA mismatch repair protein MutS
  KO
K03555  DNA mismatch repair protein MutS
Organism
lku  Apilactobacillus kunkeei
Pathway
lku03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lku00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    APS55_07420
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lku03400]
    APS55_07420
DNA repair and recombination proteins [BR:lku03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     APS55_07420
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_IV MutS_II AAA_14 nSTAND3 Rad17 GAT AAA_29
Other DBs
NCBI-ProteinID: ALJ32039
Position
complement(1562839..1565460)
AA seq 873 aa
MASKTKQTPMMEQYQKVKDRYPDAFVFYRLGDFYEMFNEDAVKGAQILELTLTSRSKNAD
NPIPMCGVPHKAVESYIDTLIDKGYKVAIVEQMEDPKLAKGMVKRAVTQLVTPGTRTTMG
AENAKDNNYLTAIEYSDAGYGFAYAELSTGELKTTVLSNMNSVLNELMTLQTKEVIVNRE
IPEKDVALINKVGILVSYQDDIKELDDMQYLSEGLRQDLEKKVVNRLTTYIVDTQKRSLS
HMRAAVAYKPAEFLKMDHNSQYNLELTKNLRTNKKSGSLLWLLDETKTAMGGRKLREWID
HPLIDKASIENRQNQVDDLLNHYYERSEITDMLVKVYDLERLAGKVSFGSVNGRDLVQLK
TSLQQIPKIKYILDEMDTKSFDEINNDLDPVDEVSELIEKAITEEPPISVTDGGVIKDGY
NEMLDQYRDAMNNGKQWIAELESKERELTSINNLKIGYNHVFGYYIEVSKANLSKLPEDR
YERKQTLTNAERFSTPELKEKEKLIIEAQEKSKTLEYELFSEVRDVVKSAIQRLQKLANA
VSSLDVMQSFASISDEYRLVRPTLNEEHKLEIVDGRHPVVEKVMGHQSYVPNDVIMDPGT
NVLLITGPNMSGKSTYMRQLALTVIMAQIGCFVPAKSAEMPIFDQIFTRIGAADDLISGQ
STFMVEMKESNEAIQNATDNSLILFDEIGRGTATYDGMALAQSIIEYVHNHIHAKTLFST
HYHELTELADSLDELQNVHVGAVEKNGELVFLHKVKKGAADKSYGIHVAKLAGLPNELLS
RADVILSDLENNNEKTNTDNVVMAEKSNPVVEDEIDEPEQQLSLFGDVKEPQKKKRKSGE
DKILKALKDLDLMSKTPMDIMNEVYKWKREIDK
NT seq 2622 nt   +upstreamnt  +downstreamnt
atggctagtaaaactaaacaaacaccaatgatggaacaatatcagaaagtaaaagatcgg
tacccagatgcttttgttttttatcgtcttggtgacttttatgaaatgttcaatgaagat
gcggtaaaaggggcccaaattcttgaactaacattaacttctagaagtaagaatgccgac
aatccaatcccaatgtgtggagtgccacacaaggcggttgaatcatacattgacacatta
atcgataagggttataaagtcgcaattgtagaacaaatggaagaccctaagttggcaaag
ggaatggtcaaaagagccgttacccaattggttacccctggtaccagaactacaatgggt
gccgaaaatgctaaggataacaactacttaacagcaattgaatattcagatgctggttat
ggttttgcgtacgctgaactatctactggtgaattaaagaccactgttttaagcaatatg
aacagtgttttaaacgagttaatgaccctacaaactaaggaagtaatcgttaatcgtgaa
atccctgaaaaagatgttgcactaattaataaggttggtatcttggtttcatatcaagat
gacattaaagaattagatgatatgcaatatctttcagaaggtctaagacaagacctagaa
aagaaggtcgtaaatcgactaactacttacattgtggacactcaaaaacgtagtctttct
catatgagggcagctgttgcatacaagccagctgaattcttgaagatggatcacaattca
caatacaaccttgaattaaccaagaacttaagaaccaacaaaaagtcaggtagtttacta
tggctattggatgaaaccaaaacagcaatgggtggtagaaaattacgtgaatggattgac
catccactaattgacaaagcatctatcgaaaaccgtcaaaaccaagtcgacgatttattg
aatcattactatgaacgtagtgaaatcactgacatgttggtaaaggtttatgatttagaa
agacttgctggtaaggtatcttttggttcagttaacggtcgtgacttagttcaattaaag
acatcattgcaacaaattccaaagattaaatacattttggatgaaatggataccaaatca
tttgatgaaattaacaatgatttagacccagtcgatgaagtatcagaactaattgaaaag
gcaattactgaagaaccaccaatctcagtcactgatggtggagttattaaagatggctac
aacgaaatgttggatcaatacagagatgcaatgaacaatggaaaacaatggattgccgaa
ctggaaagtaaggaacgtgaacttaccagtatcaataacctaaagattggttacaaccat
gttttcggttactacattgaagtttcaaaggccaacctaagcaagttgccagaagataga
tatgaaagaaagcaaactcttaccaatgctgaaagattctctacacctgaactaaaggaa
aaagaaaagttaatcattgaagcacaagaaaaatcaaagacacttgaatacgaattattc
agtgaagtccgcgatgttgttaagagtgcaattcaaagattacaaaaactagccaatgcg
gtatctagtttggatgtaatgcaaagctttgcatctatttctgatgaatacagattggtt
cgtccaacattaaatgaagaacataagctagaaattgttgatggtagacatccggtggtt
gaaaaggttatgggtcatcaatcatacgtgccaaacgacgtgattatggatccaggcact
aacgtcttgttaatcactggtcctaatatgtctggtaagagtacttacatgcgtcaattg
gctttaacagtcatcatggcccaaattggctgtttcgttcctgctaagtcagctgaaatg
ccaatttttgaccaaatctttaccagaattggtgctgccgatgatttaatttctggtcaa
agtaccttcatggttgaaatgaaggaatcaaacgaagcaattcaaaatgctaccgataac
agtttgatcctattcgatgaaattggtagagggacagccacatatgatggaatggcgtta
gcacaatcaatcattgaatatgttcataaccacatccatgctaagacactattttctact
cactaccatgaattgactgaactagccgattcattggatgaactacaaaatgttcatgtt
ggtgcggttgaaaaaaatggtgaactagtctttctacacaaggtaaagaagggtgctgcc
gataagtcatatggtattcacgttgctaaattagctggtttaccaaatgaattattatcc
agagcagacgtcatcttaagcgacttggaaaacaacaatgaaaagactaataccgacaat
gttgtcatggcagaaaaatcaaatccagtcgttgaagacgaaattgatgaaccagaacaa
caactttcattatttggggatgtcaaagaaccccaaaagaaaaaacgtaagagtggcgaa
gataagattctaaaagctcttaaggacttagacttgatgtctaagacaccaatggatatt
atgaatgaagtatataaatggaaacgcgaaattgataaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system