KEGG   Lactococcus lactis subsp. lactis KLDS 4.0325: P620_09115
Entry
P620_09115        CDS       T02882                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
lld  Lactococcus lactis subsp. lactis KLDS 4.0325
Pathway
lld03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lld00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    P620_09115
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lld03019]
    P620_09115
Messenger RNA biogenesis [BR:lld03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     P620_09115
SSDB
Motif
Pfam: RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Lactamase_B_6 BHD_3 eIF-1a
Other DBs
NCBI-ProteinID: AGY44519
Position
complement(1769003..1770715)
AA seq 570 aa
MSNIKITPLGGVREFGKNMYLVEVEEQIFVLDAGLKYAEMDQLGVDFVIPDITYLLENAD
RVAGIFLTHGHADSIGALPYIVSELKVPVFGSELTIELAKINVKNYADSRKFNDFHVVTE
DTEIDFGKAVISFFSTTHTIPESLGIVISTNDGNIVYTGDFRFDPAVAKGYRTNMRRLAE
IGNSGVLALLSSSPNALSTMQSASEHEIYEKIYDYIDDNEGRVIIACNAGNLGRIQQTID
AAIKLGRRVAFTGEDMDQIIETATRLNKLQIVDKKSIIKPAEIKKYADNELVILETGRMG
EPLKSLGDMAHRRHKYVKIKDGDLVLAVTSPSVSYETTIARIENEIYKAGGVMKMLASDL
KISGHANARDLQFLLDIFRPKNLIPIQGEYRELSAHADLAMEMDILPEHIFIAKRGETVS
LENGDMIPSGVIQAENVMIDGSGVGDIGSVVLRDRKVLSEDGIFIAVITISKTERKIVSK
SRVHTRGFVYVKTSRDLMREAGELVNETVDKYLSGKEFDWAEIKGSIRDALGKFLYEQTK
RKPVILPVVMEARQPQDLNKRYTKKNHNKK
NT seq 1713 nt   +upstreamnt  +downstreamnt
atgtctaatattaaaatcactccattaggtggtgtgcgtgaatttggtaagaacatgtat
ttagttgaggttgaagagcaaatttttgtgcttgatgcaggacttaaatatgctgaaatg
gatcaacttggtgttgactttgttattcctgatattacatatcttttagaaaatgcggat
cgtgtcgcaggaattttcttgactcacggacatgctgattcaattggtgctttgccttat
atcgtttctgaattaaaagttcctgtttttggttcagaattaacaatcgaacttgcaaaa
attaatgtcaaaaattatgctgacagtcgcaaattcaacgattttcatgttgtaactgaa
gatacagaaattgattttggtaaagccgtcatttcattcttctcaacaacacatacaatt
ccagaaagcttaggaattgtgatttctacaaatgacggaaacattgtttatacaggtgat
ttccgttttgatccagctgttgcaaaaggctatcgtaccaatatgcgccgattggctgaa
attgggaatagtggagtccttgctttactttcgtcatcaccaaacgctttgtcaacaatg
caatctgctagcgagcatgaaatttatgaaaaaatttatgactatattgatgacaacgaa
ggacgggtcattattgcttgtaacgcgggtaatttaggacgtattcaacaaacgattgat
gctgccattaaacttgggcgtcgtgttgcttttacaggcgaagatatggatcaaatcatc
gaaacagcaactcgtcttaacaaattacaaattgttgataaaaaatcaattattaaacca
gcagaaattaaaaaatatgctgataatgagttagttattttagaaacaggacgaatgggt
gaaccacttaaatctcttggagacatggctcatcgtcgtcataaatacgttaaaattaaa
gatggagatttagtacttgctgttacaagtccatctgtctcttatgaaacaacaattgct
cgtattgaaaatgaaatctataaagctggcggagtcatgaaaatgttggcttcagatttg
aaaatatctggtcacgcgaatgctcgtgatttgcaattcttacttgatattttccgtcca
aaaaatttgattccaatccaaggggagtatcgtgaacttagtgcccatgctgatttagca
atggaaatggacattttaccagaacatatctttatcgctaaacgtggcgaaacagtcagt
ttggaaaatggagacatgatcccatctggtgttattcaagctgaaaatgttatgattgac
ggttcaggagttggagatatcggttcagttgttttacgtgaccgtaaagtgctatcagaa
gatggtattttcattgccgttatcacaatttctaagactgagcgtaaaatcgtcagcaaa
tctcgtgttcacactcgtggttttgtttatgttaaaacttcacgtgatctgatgcgtgaa
gctggtgagttggtcaacgaaactgttgataaatatctttctggaaaagaatttgattgg
gcagaaatcaaaggttctatccgtgatgctcttggaaaatttttatacgagcaaacaaaa
cgtaaaccagtgattcttccagtagttatggaagcacgtcaacctcaagatttaaataaa
cgttacactaaaaaaaatcataataaaaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

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