KEGG   Leuconostoc lactis: BCR17_05005
Entry
BCR17_05005       CDS       T04460                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
llf  Leuconostoc lactis
Pathway
llf03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:llf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BCR17_05005
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:llf03021]
    BCR17_05005
   03400 DNA repair and recombination proteins [BR:llf03400]
    BCR17_05005
Enzymes [BR:llf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BCR17_05005
Transcription machinery [BR:llf03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     BCR17_05005
DNA repair and recombination proteins [BR:llf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      BCR17_05005
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_3 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1
Other DBs
NCBI-ProteinID: ANY11766
UniProt: A0A1B2A178
Position
1006128..1009742
AA seq 1204 aa
MAGHLVKYGKHRTRRSYASIKEVLDVPNLIEIQTASYQWFLDEGIKEMFGDIMPIDDFQG
NLSLEYVDYKLMEPKYNIDEAREHDANYSAPLHVTLRLTNHETGEIKSQDVFFGDFPLMT
EQGTFIINGAERVIVSQLVRSPGIYYNQENDKNGRPRYGTTVIPNRGAWLEYETDAKGIA
NVRIDRTRKLLMTELVRALGFGSDSDIIDIFSDQYDALNMTLEKDVHKDMSDSRVEEALK
DIYERLRPGEPKTADSSRALLVARFFDPKRYDLASVGRYKINKKLSLKTRLLNQTLAETL
ADPDSGEIIAEKGTLVDKTVMSKLSPYLDRPDFKTTTYTPSGDAVLNEPVTLQKIKIESP
ENPEKTLLLIGNGHIGEDDRTVRPADILAGMNYFLNLQEGVGNVDDIDHLGNRRIRSVGE
LLQNQFRIGLTRMERVVRERMSIQDANTVTPQQLINIRPVVAAVKEFFGSSQLSQFMDQT
NPLGEMNHKRRLSALGPGGLTRDRAGVEVRDVHYTHYGRIDPIETPEGPNIGLINSLATY
GRINKYGFIETPYRRVDWTTHKVTDKIDYLTADEEDNYIVAQANSPLNEDGSFVHDTVMA
RFGEENIETPIDRIDYMDVSPKQVVSVGTAAIPFLENDDSNRALMGANMQRQAVPLLDPH
APLVGTGIEYKAAHDSGVAMISRAAGVVEYVDGREIRVRREDGQLDTYELMKFRRSNGGK
NYNQKPIVREGEHVEADEVLADGPSMEKGELALGQNPLIAFMTWQGYNFEDAIVLNERLV
REDVYTSIHIEEYDSEARDTKLGPEEITREIPNTGEDQLKDLDANGIIRIGAEVHDGDIL
VGKVTPKGVTELSAEERLLHAIFGEKAREVRDTSLRVPHGGGGVVQNVRIYTPENGDELA
PGVNMMVRVYIAQKRKIQVGDKMAGRHGNKGTVSVVVPEEDMPYMPDGTPIDILLSPMGV
PSRMNIGQVLELHLGYAAKELGIHVASPVFDGASDDEIEAALREAGLPRDGKSVVYDGRT
GEAFDKRVGVGVMHYMKLAHMVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWA
LEAYGAAYTLQEILTYKSDDVAGRVKVYESIIKGEPIPRPGVPESFRVLVKELQALGLDM
QVLDGAGDEVELRQMDEDDSILPVDALEKLVRSNPDLLNKEDEEVAAAFSKVEAQEMTDT
TDEA
NT seq 3615 nt   +upstreamnt  +downstreamnt
gtggcaggacatttagtaaagtacggtaagcaccgtactcgtcgttcatatgctagcatc
aaagaagtgcttgatgtgccaaatttgattgaaattcaaacggcgtcatatcaatggttc
ttggatgaaggtattaaagaaatgtttggcgacatcatgccaatcgatgatttccaaggc
aacttgtcattggaatacgtcgattacaagttgatggaaccaaagtacaacattgatgag
gcgcgtgaacacgacgccaactactcagcaccattacacgttactttgcgtttgacgaac
catgaaactggtgaaatcaagtcacaagacgtgttctttggtgatttcccattgatgaca
gaacaaggcacgttcattatcaatggtgctgaacgtgttatcgtttcacaacttgtgcgt
tctcctggtatctattacaaccaagaaaacgacaagaacggtcgcccacgctatggcaca
acggttatcccaaaccgtggtgcttggttggaatacgaaacagatgctaagggtatcgct
aacgtgcgtattgaccggacacgtaagttgttaatgacagaattggtccgtgcccttggt
ttcggttcggattctgatattatcgacatcttctcagaccaatatgacgctttgaacatg
actttggaaaaagacgtgcacaaagatatgtcagattcacgtgttgaagaagcgctgaag
gacatttacgaacgactacgtccgggtgaaccaaagacagctgattcatcacgtgccttg
ttggttgcgcgtttctttgatccaaagcgttatgatttggcatcagttgggcgttacaag
atcaacaagaagttgtcattgaagacacgtttgttgaaccaaacattggctgaaacattg
gctgatcctgattcaggtgaaatcatcgccgaaaagggcacattagttgataagacagtg
atgtcaaagcttagcccatacttggatcgtccagacttcaagacaacaacgtatacacca
tctggtgatgctgtgttgaacgaaccagtaacgcttcaaaagattaagatcgaatcacct
gaaaaccctgaaaagacattgcttttgattggtaatggtcacatcggggaagacgaccgc
acagtgcgtccagccgatattttggcaggcatgaactacttcttgaacttgcaagaaggt
gttggtaacgttgacgatatcgatcacttgggtaaccgtcgtattcgttctgttggtgaa
ttgttgcaaaaccaattccgtattggtttgacacgtatggaacgtgtggttcgcgaacgg
atgtcaatccaagacgctaacactgtgacaccacaacaattgattaacattcgaccagtt
gtggcagccgtgaaggaattctttggttcatcacaattgtcacagttcatggatcagaca
aacccattgggtgaaatgaaccacaagcgtcgtttgtcagcccttggacctggtggtttg
acacgtgatcgtgccggcgttgaagtgcgagatgtgcactacacgcattatggccgtatt
gacccaatcgaaacgcccgaaggtcctaacatcggtttgatcaactctttggcaacgtat
ggtcgcattaacaagtatggcttcattgaaacaccataccgtcgtgttgactggacaacg
cacaaggtaactgacaagatcgattacttgactgccgatgaagaagataactacatcgtg
gcacaagcgaactcaccattaaatgaagatggtagcttcgttcacgatacagtgatggcc
cgtttcggtgaagaaaacattgaaacaccaattgaccgcattgactacatggacgtttcg
cctaagcaagttgtttctgttggaacagctgcgattccgttcttggaaaacgatgattcc
aaccgtgccttgatgggtgccaacatgcaacgtcaagcggtacctttgcttgatcctcat
gcaccacttgttgggacagggatcgaatataaggctgcgcacgactcaggggttgccatg
atttctcgtgccgctggtgtcgttgaatatgttgatggtcgcgaaattcgtgttcgtcgt
gaagacggtcaattagatacgtatgaattgatgaagttccgccgttctaacggtggtaag
aactataatcaaaagccaattgttcgtgaaggtgaacatgtcgaagctgatgaagttttg
gcggatggcccttcaatggaaaagggtgaactagctttgggacaaaacccattgatcgcc
tttatgacttggcaaggttataacttcgaagatgccatcgttttaaacgaacgtttggtc
cgtgaagatgtttatacgtcaattcacatcgaagaatatgattcagaagcccgtgataca
aagctcggaccggaagaaatcacacgtgaaattccaaacactggtgaagatcagttgaag
gatttggatgcgaacggtattatccgtatcggtgccgaagtgcatgacggtgatatcttg
gttggtaaggtaacgcctaagggtgtgactgaattatcagccgaagaacgtttgctccat
gccatctttggtgaaaaggcccgcgaagtacgtgatacttcattgcgtgtgccacacggt
ggtggcggtgttgtgcaaaacgtccgcatttacacaccagaaaacggtgatgaacttgcc
ccaggtgtgaacatgatggtacgtgtgtacatcgcgcaaaagcgtaagattcaagtcggt
gataagatggccggtcgtcacggtaacaagggaacggtttccgttgttgtccctgaagaa
gacatgccatacatgccagatggtacgccaattgacatcttgttgtcacccatgggtgtg
ccttcacgtatgaacattggacaagtgcttgaattgcatcttggttatgcagctaaggaa
cttggtattcacgttgcctcaccagtctttgacggtgctagcgatgatgaaatcgaagca
gctttgcgtgaagctggtttgccacgtgatggtaagtcagttgtttatgatggtcgtact
ggtgaagccttcgacaagcgtgttggtgttggtgtcatgcattatatgaagctggcccac
atggttgatgataagattcacgcccgttcaatcggaccatactcattagtaacgcaacag
ccgttgggtggtaaagcccaattcggtggtcagcgtttcggtgaaatggaagtttgggcc
cttgaagcttatggtgctgcttacacgttgcaagaaattttgacttacaagtcagatgac
gttgcaggtcgtgtgaaggtctatgagtcaattattaagggtgaaccaatcccacgtcca
ggcgtgccagaatcattccgagtattggtgaaggaattgcaagcccttggcttggatatg
caagtcttggatggcgcaggcgatgaagttgaacttcgtcaaatggatgaagatgactca
atcttgccagttgatgcgcttgaaaagttggtacgctcaaatcctgatctcttaaacaaa
gaagatgaagaagttgcggctgcattctctaaggtagaagcccaagaaatgacagacaca
actgacgaagcttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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