KEGG   Lactococcus lactis AI06: LG36_0398
Entry
LG36_0398         CDS       T03480                                 
Symbol
holB
Name
(GenBank) DNA polymerase III, delta subunit
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
llj  Lactococcus lactis AI06
Pathway
llj03030  DNA replication
llj03430  Mismatch repair
llj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:llj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LG36_0398 (holB)
   03430 Mismatch repair
    LG36_0398 (holB)
   03440 Homologous recombination
    LG36_0398 (holB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:llj03032]
    LG36_0398 (holB)
   03400 DNA repair and recombination proteins [BR:llj03400]
    LG36_0398 (holB)
Enzymes [BR:llj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LG36_0398 (holB)
DNA replication proteins [BR:llj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LG36_0398 (holB)
DNA repair and recombination proteins [BR:llj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LG36_0398 (holB)
SSDB
Motif
Pfam: DNA_pol3_delta2 pAdhesive_11 Mannitol_dh Pilus_CpaD Vps39_1
Other DBs
NCBI-ProteinID: AIS02998
Position
423725..424585
AA seq 286 aa
MEIRDIQPQLYKQFSTILQHGKLSHAYLFSGGFGSFELAIWLSQALFCENPENALPCGHC
RSCRLVAQQEFTDLHIVEPDGQTIKTAQIRELTQVFNESGYEGNQQVLLIKEAEKMHPNA
ANALLKSIEEPETEIVVFLLTDNENMILQTIKSRTQIINFQKNVQYLQDFLEKNGILKTQ
AELLAEICNSTDKALELAQQSWFIEGLQRLQQFVKLLKKSADEAFLYLKELVEIFDDKEK
QNQAFELLLQLFNQERMSQELLKTFQAIKMWKSNVRFESSLTFIVL
NT seq 861 nt   +upstreamnt  +downstreamnt
gtggaaataagagatattcagcctcaactttataagcagttctcaacgattttgcaacat
ggaaaattaagtcatgcttatttattttcagggggatttggttcttttgaattagcaatc
tggctgagtcaagccttattttgtgagaatcctgaaaatgctttgccttgtggtcattgt
cgttcttgtcgtcttgttgcacaacaagaatttactgacttacatatcgttgaacctgat
ggacaaacgattaaaacggcacaaattcgggagctgacacaggttttcaatgaatctggt
tatgagggaaatcaacaggtgcttttaattaaggaagctgaaaaaatgcatcctaatgca
gcaaatgctctattgaaatcaattgaagaaccagaaacagaaattgttgtttttttactg
acagacaatgaaaatatgattttacaaacaataaaatcacggacacaaattattaatttt
caaaaaaatgttcaatacttacaagattttttggaaaagaatggtattttaaaaacacaa
gcagaacttcttgcggaaatctgtaattcgactgacaaagcattagaattagctcagcag
agctggtttatcgaaggacttcaaagacttcaacaatttgtaaaacttttaaaaaaatct
gctgacgaggcgttcttgtatttgaaagaattagtcgaaatttttgatgacaaagaaaaa
caaaatcaagcgtttgaacttttattacaactttttaatcaagaaagaatgagtcaggaa
cttttaaaaacatttcaggcaataaaaatgtggaaaagcaatgtccgatttgagtcaagt
ttaacttttattgttttatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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