KEGG   Lactococcus lactis subsp. cremoris MG1363: llmg_2409
Entry
llmg_2409         CDS       T00475                                 
Symbol
polC
Name
(GenBank) DNA polymerase III alpha subunit
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
llm  Lactococcus lactis subsp. cremoris MG1363
Pathway
llm03030  DNA replication
llm03430  Mismatch repair
llm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:llm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    llmg_2409 (polC)
   03430 Mismatch repair
    llmg_2409 (polC)
   03440 Homologous recombination
    llmg_2409 (polC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:llm03032]
    llmg_2409 (polC)
   03400 DNA repair and recombination proteins [BR:llm03400]
    llmg_2409 (polC)
Enzymes [BR:llm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     llmg_2409 (polC)
DNA replication proteins [BR:llm03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     llmg_2409 (polC)
DNA repair and recombination proteins [BR:llm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     llmg_2409 (polC)
SSDB
Motif
Pfam: DNA_pol3_alpha RNase_T DNA_pol3_finger PHP DNA_pol3_a_NI DNA_pol3_a_NII HHH_6 tRNA_anti-codon RNase_H_2 HHH_3 DEDDh_C Rv2179c-like Zn-ribbon_8
Other DBs
NCBI-ProteinID: CAL98973
UniProt: A2RNT0
Position
complement(2347351..2352258)
AA seq 1635 aa
MENLFEKLMDQIKMPPNLRRSRQFEHADIENVEVHTASKLWHFQLIFDEILPIDTYKLLT
ELTETAFSTIARTEISVSSREIVIDEQKLNDYYQYALTLPELCDSAFSSIFKKYHLELQE
EKIQLMVEDNPRMDFFVEKYFPILEEKFADFGFGKLKIIPVVDQQLTDLQVAAHAEKVAA
RLAAQTAEQAQVSELKKQRSEERESKNTREAKPEFVETALSDGIFFGRKISGQSPITSMS
FIAGEGFGVIFEGLVFEAAHREFTGKESGKVNHILELKMADETSTFMISKWGRKDEEIAQ
FDQIVSTVKAMNEKILTDGADNFTDSLSDALWLRVQGNIEHDKYKDDLVMTANAVVEIKP
KPTIDRVALQIKAVKSDKIQLGREIKNNEPVTPMRSVSEFSTNGPVVFEGYVFKGELREI
KSRKTGNISYLLEFEMTDYTSSFYVQKWLRGEEEIQLAKQIKAGLWCRVRGNVQRDNFKN
DLVLQLTDLIEIPTQNVREDKSDEKRVEFHAHTNMSQMDAIPSASSLVAQAAKWGHKAIA
ITDHGGLQSFPEAHSAGKKNGVKIIYGVEANLVEDKIPIVFNETDVDMYESTYVVFDVET
TGLSAVHNDLIQIAATKMHKGNPIDEFDEFINPGYRLSEFTTELTGITDDHVKNAKPLYE
VLTKFQKFCEGTILVAHNASFDVGFMNMNYSRNGLPIISQPVVDTLEFARNLYPEMKRFG
LGQLTKKFQIGLEHHHMANFDAEATGRLLFVFLEELRTRNTGWTSLLELNAKLVSEDSYK
KVRPKHVTLYAKTQEGLKNLFKIVSFGNVKYYAGLPRLPRSVLEANSEGLLVGSACEVGE
VFDAAINKTFEETLEIAKFYDFIEVFPPALYRSLVVGGSFKSEKELEQTLKDLIKIGKTL
GKPVLATGNLHYLNPEDAIYREIIVRSLGLGAEINWTQGHGEHAKPLPLPEAHFRTTDEM
LEAFSFLDEKTAREIVIDNTQKMADEFDVLTPVRDDLYTPKMVFDGGETSEERIVRLTYE
KAHEWYGNPLPDIIDARLEKELRSILGNGFSVVYIISQELVKRSNERGYIVGSRGSVGSS
LVATMIGITEVNPLAPHYRCPECQYFECYDDGSFGSGYDMPDKNCPKCDHKLIKDGHDIP
FETFLGFKGDKVPDIDLNFSGDDQPLAHLDVRDIFGEDYAFRAGTIGTVAEKTAFGFVKG
YERDYDQFYGNAEIDRLAAGSTGVKRTTGQHPGGIIVIPNYMDVYDFSPVQFPADDVNAE
WQTTHFDFHAIHDNILKLDILGHDDPTMIRKLQSLSGIVPQDIPMDDPGVMKLFTGTESL
GLTEEQLGVKLGTLGIPEMGTFTSMNMIAEAKPKNFADLLQISGLSHGTDVWSGNAQDLI
RSGIADLSSVIGCRDDIMVYLIHKGLENGLAFTIMERVRKGMWNKIPAEEREKYVEAMRE
HEVPEWYIESCSKIKYMFPKAHAAAYIMMALRVAYFKVHHPIFYYCAWFSIRATAFDIGV
MGAGLEAVKAKMKEIKDKGFEATNVETNLYTTLELCNEMLERGFTFGKIDLYRSEATEFV
IDGDTLIPPFVTMDGLGENVAKQIVAARAEGEFLSKMELRKRGGVSQTIIENMTNMGVLE
GMPDDNQLSLFDDFF
NT seq 4908 nt   +upstreamnt  +downstreamnt
atggaaaatctttttgagaaattgatggatcagatcaaaatgccaccaaacttgcgtcgt
tctagacagtttgagcatgctgatattgaaaatgttgaagtgcatacggcaagtaagctc
tggcactttcagttaatttttgacgagattttaccaattgacacatataaattactgaca
gaattgacagagacagctttttctacaatcgctcgtacagaaatttctgtcagtagccgt
gaaatagtcattgacgagcaaaaacttaatgattattatcaatatgcgctgacacttcct
gaactttgtgattctgcattttcaagtatttttaagaaatatcatcttgaattgcaggaa
gaaaaaattcagttgatggttgaagataatccacgaatggacttttttgttgaaaaatac
tttccaattttagaagaaaaattcgcagattttggtttcggaaaattaaaaattattcca
gtggttgatcaacaattaaccgacttacaggtggctgctcatgccgaaaaagtagccgct
cgcttggccgctcaaacggcagagcaagctcaagtttcggagcttaaaaaacaacgctca
gaggaacgtgaaagtaaaaatactagagaagccaaaccagaatttgtagagacggcactt
tctgatgggattttctttggtcgaaaaatcagtggacaaagtccaattaccagtatgtct
ttcatcgctggggaaggctttggggttatctttgaaggtcttgtttttgaggccgcacat
cgcgaatttacaggaaaagaatcaggtaaagtcaatcatattttagaattgaaaatggct
gatgaaacatcaacctttatgatttccaaatggggtcgtaaggacgaagaaattgcacaa
tttgaccaaattgtcagcaccgttaaagccatgaatgaaaaaattcttactgacggagcg
gataattttactgacagcctatctgatgccctttggttacgtgtgcaaggaaatattgaa
cacgacaaatacaaagatgacttagtaatgacggcaaatgcggttgttgaaatcaaacct
aaaccaaccattgaccgtgtggctctccaaatcaaagctgtaaaatcagataaaattcaa
ctgggccgtgaaatcaaaaataatgagccagtcactccgatgcgttctgtcagtgaattt
tctactaacggtcccgttgtttttgaaggttatgtcttcaaaggggaactccgcgaaatc
aaatcacgtaagacaggaaatatcagttatcttcttgaatttgaaatgactgattacacg
tcaagtttttatgtgcaaaagtggttacgtggcgaagaagaaattcaattggccaaacaa
attaaagcgggactatggtgtcgagttcgcgggaatgttcaacgggacaatttcaaaaat
gatttagtgctacaattgactgatttgattgaaattccgacacaaaatgttcgtgaagat
aagtctgacgaaaaacgtgttgagtttcatgcccatactaatatgagccaaatggacgcg
attccgtcagcttcaagtttagttgctcaggctgcaaaatggggacacaaagccattgca
attactgaccatgggggcttgcaatctttccctgaggctcactcggcaggtaaaaagaat
ggggtcaagattatttatggagtcgaggccaatcttgtcgaagacaaaatcccaattgta
tttaatgaaacagatgttgatatgtatgaatcaacttatgtcgtctttgacgtcgaaaca
acaggtctttcagcagttcataatgatttgattcaaattgcagcaacaaaaatgcacaaa
ggaaatcccattgatgaatttgatgaatttattaatccgggttatcgtttgagcgaattt
acaacagaactaaccggaattactgatgaccatgtcaaaaatgccaaaccgctttatgaa
gtactgacgaaatttcaaaaattttgcgaaggaacaattcttgtcgctcataatgcatcc
tttgacgtgggcttcatgaatatgaactattcacgaaatgggctgccgattattagtcaa
cctgtcgttgatactcttgaatttgcccgtaatctttacccagaaatgaaacgttttggt
ctgggtcaattgactaagaaattccaaatcggacttgaacatcaccatatggccaatttt
gacgcggaagcaaccgggcgtttgctctttgtattcttggaagaattacggaccagaaac
acagggtggacaagtctgttagaacttaatgccaagttggtcagtgaagattcttataaa
aaagtacgaccaaaacacgtgactttatatgccaaaacacaagaaggacttaaaaatctc
ttcaagattgttagttttggaaatgtgaaatattatgctggtcttcctcgtcttcctcgg
tcagttttggaagccaatagcgagggattacttgttggttcagcctgtgaagtcggcgaa
gtcttcgatgcagcgattaataaaacttttgaagaaacgcttgaaattgctaaattttat
gatttcattgaagttttcccaccagcactttatcgctcacttgttgtcggcggctctttc
aaatcagaaaaagaattggaacaaacgcttaaagatttgataaaaatcggaaaaacgctt
ggcaagccagttctggccacaggaaatctccattatctgaatccggaagatgccatttat
cgtgaaattattgtccgttcactaggtcttggggcagaaattaactggacacaaggacac
ggggaacacgctaaaccattgccattaccagaagctcactttagaacaactgatgaaatg
cttgaagcctttagttttcttgatgagaaaacagcgcgtgaaattgtcattgacaatacc
caaaaaatggctgatgagttcgatgttctcactcctgttcgtgatgatttatatacacct
aaaatggtctttgacggaggagaaacctcagaagagcggattgttcgcttgacttatgaa
aaagcccacgagtggtatggaaatccattgccagatattattgatgcacgacttgaaaaa
gaactgcggtcaattttggggaatggtttctcagttgtttatattatttcacaagaactt
gtaaaacgttctaatgagcgtggatatattgttggttctcggggatcagttggttcgtca
ctggttgcgaccatgattggaattaccgaagtaaatccactggcacctcattaccgttgc
ccagaatgtcaatattttgaatgctatgatgatggatctttcggttcaggttatgatatg
ccggataaaaattgtcctaaatgtgaccacaaactcatcaaagatggtcacgatattccc
tttgaaactttcctaggtttcaagggggacaaagttcccgatattgacttgaacttttca
ggggatgaccaacctttggctcacttggacgttcgcgatattttcggggaagattacgct
tttcgggcgggaacaattggtacggttgccgaaaaaacggcttttggtttcgtcaaaggc
tacgaacgtgactatgaccaattttatggcaatgctgaaattgaccgtttagctgccgga
tcgacgggtgttaagcgaacaacaggtcaacacccaggagggattattgttattccaaat
tacatggatgtttatgatttttctccagttcaatttccagccgacgatgtcaatgccgaa
tggcaaacgactcactttgatttccatgccattcatgataatatcttgaaactcgatatt
cttggacatgatgatccaacgatgattcgaaaattgcaaagtctttctggtattgttcct
caagacattccgatggatgaccccggagtgatgaaacttttcaccggtacagaatcttta
ggtttgaccgaagagcaattgggagtaaaactcgggactcttgggattcctgaaatggga
acttttacctcaatgaatatgattgccgaagccaaacccaaaaatttcgctgatttactg
caaatttctggactttcccatggaacagacgtatggtcaggaaatgcccaagatttaatt
cgttcaggaattgccgacctttcaagtgttatcggttgtcgggatgatattatggtctat
ctcatccataaaggacttgaaaatggtcttgcttttacaattatggagcgtgtacgtaag
ggaatgtggaataaaattcctgccgaagaacgtgagaaatatgtggaagccatgcgagaa
catgaggttcctgaatggtatattgagtcttgttctaagattaaatatatgttccctaaa
gcccatgcggcagcttatattatgatggctctgcgggtggcttatttcaaagtacatcat
ccaattttctattactgcgcatggttctctatcagggcaacggcctttgatattggtgtc
atgggggctggtcttgaagcagtcaaagcaaaaatgaaagaaattaaggataaaggtttt
gaggctacaaatgtggaaactaacctttatacaactttggaactctgtaatgaaatgtta
gagcgtggcttcacttttggtaaaattgacctttaccgctctgaggctacggagtttgtc
attgacggtgacactttgattccgccatttgtaacgatggacggattgggtgaaaacgtg
gcaaaacaaatcgtcgcagcgcgtgctgagggtgaatttttgagtaagatggaacttcgt
aaacgtgggggagtttcacaaaccattattgaaaacatgaccaatatgggcgttcttgaa
gggatgcctgatgataatcaattaagcttatttgatgatttcttttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (26)   

Download RDF
DBGET integrated database retrieval system