KEGG   Leisingera methylohalidivorans: METH_08920
Entry
METH_08920        CDS       T02961                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
lmd  Leisingera methylohalidivorans
Pathway
lmd03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:lmd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    METH_08920
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lmd03400]
    METH_08920
Enzymes [BR:lmd01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     METH_08920
DNA repair and recombination proteins [BR:lmd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     METH_08920
 Prokaryotic type
     METH_08920
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: AHD00783
UniProt: V9VS13
Position
1715564..1716217
AA seq 217 aa
MTRLPAGLGAWSSLPFFTGHWPGLSAAIAGDPREILPPAHLRFAALELTQPQHTRVVILG
QDPYPTPGHAHGLAFSAEPHVHPLPRSLSNIYKELEDDLGVTRPNADLRGWASQGVLLLN
TALTVPAGEANGHKHLGWQYLVHQVLDRTSERPTAYILWGNAAQKLEKHIKPGDHLILKT
AHPSPLSARRGFFGSRPFSKVNNWLAARGESGIDWNA
NT seq 654 nt   +upstreamnt  +downstreamnt
atgacccgcttgccagcggggctgggcgcctggtccagcctgccttttttcaccggccat
tggcccggactctcagccgcaattgccggggatccgcgcgaaatccttccgcccgcgcat
ctgcggtttgccgcactggaactgacccagccgcagcacacccgcgtggtgatcctgggc
caggatccttatccgacgccgggtcacgcccatggcctggccttttccgctgaaccgcat
gtccacccgcttccgcgctctttgtctaacatttacaaagagctggaagacgatcttggc
gtaacccgcccaaatgcagacctgcgtggatgggcaagccagggcgttctgctcctgaac
accgcccttaccgtgcccgcaggcgaggcgaacggccacaagcacctgggctggcagtat
ctggtgcatcaggtgctggaccggacctcagaacgccccacggcttacattctatgggga
aatgcagcacaaaagcttgaaaaacatatcaaaccgggcgatcacctgatcctgaaaact
gcccatccctcgcccctgtcggcgcggcgcggcttcttcgggtcccggcccttttcaaaa
gtgaataattggctcgctgcccgcggtgaaagcggcatagactggaacgcataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (23)   

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