KEGG   Leishmania mexicana: LMXM_19_1020
Entry
LMXM_19_1020      CDS       T02288                                 
Name
(RefSeq) tRNA pseudouridine synthase A-like protein
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
lmi  Leishmania mexicana
Brite
KEGG Orthology (KO) [BR:lmi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lmi03016]
    LMXM_19_1020
Enzymes [BR:lmi01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     LMXM_19_1020
Transfer RNA biogenesis [BR:lmi03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    LMXM_19_1020
 Prokaryotic type
    LMXM_19_1020
SSDB
Motif
Pfam: PseudoU_synth_1 TP1
Other DBs
NCBI-GeneID: 13447878
NCBI-ProteinID: XP_003874278
UniProt: E9AS53
Position
19:399819..401396
AA seq 525 aa
MFADSARHSRWMQEQLQQSRGSSEYAEETAAPRMVRSPHSTANANQRGYAVDEDENGSAV
SGAADATAPTALSATADADVLEQELLDDNFLYYPPLTVIGEAGAAEATHALPGGEPERYV
PGQQVIPPGMTRYRVDVQYQGSDFDGWYKSVQRTRNGKNGASAGSTATAAADYGAGSRHF
AKVVLEEALAVALDVPTVSIVAAVIPETGVSVRRLTCHVDVPSEVELQPRTILQRTTLWL
HQRRQPLAVLSCHPCRNQDFHARHNGVRRVYCYRILNRIAPPLFDAGLQWHVDRYLDVPR
MQRMARLMEGTHDYGFFADSKMANALRRAAASSTGSGRGGPVVSSAYSAEHEPLTSHGLR
RGEAPAAPKVTVERGLSQLERAAALPTFNEYGQRVITYQAKPHEYHKARTNLPTIRTLDK
IEVVRQEDEILIWFVGQSFLRHQIRNMVSVLKAGGHGLWDDQELQHAFQSGFEVSRKKFK
RERLSPAPVHGLTLWDVEYPAQHRSDFVPYVDAGPYEPVDVSTQH
NT seq 1578 nt   +upstreamnt  +downstreamnt
atgttcgccgacagcgcgcggcactcgcgatggatgcaggagcagcttcagcagtcacgc
ggaagctcggagtacgcggaagagacggcggcgccacggatggtgcgctctccccacagc
accgcgaacgccaaccaacgtggttacgccgttgacgaagacgaaaatggcagtgccgtg
tcgggcgcggcagatgcgacggcacccacagcgctgtcggccaccgcagatgccgacgtg
ttggagcaagagttgctggacgacaacttcctgtactacccgccgctgacagtcatcggc
gaagcgggagctgctgaggcgacgcacgctctcccgggtggcgaaccggagaggtacgtc
cctggccagcaggtcattccgcccggcatgacgcgctaccgggtcgatgtgcagtatcaa
ggcagtgattttgacgggtggtacaagtctgtgcaacggacgagaaacggcaagaatggt
gcatcagctggcagcaccgctactgctgcggcagactacggcgccggctctcgccacttc
gccaaggtcgtgctggaggaggcgctagctgtcgcgctggacgtgccgacggtgagcatc
gttgccgctgtcattccagagacgggcgtgtcggtgcgccgcctgacgtgccatgtagac
gtgccgagcgaggtggagctgcaaccacgcaccatcctgcagcgcacgacactgtggctg
catcagcgtcgacagccgcttgccgttctcagctgtcacccatgccgtaaccaggatttc
catgcccgacacaacggagtgcggcgggtgtactgctaccgcattctaaaccgcattgca
cctcccctgtttgacgcagggttgcagtggcacgtggaccgctacctcgatgtcccgcgc
atgcagcgcatggcacgtctcatggaagggacacacgattacggcttctttgctgacagc
aagatggcgaacgcattgcggcgcgctgctgcctcttctaccggaagcggtcgagggggg
ccggtggtgtcttcggcgtacagcgcggagcatgagccactaactagccacggcctgagg
cgtggcgaggcgccagcggcgccgaaggtgacggtcgagcgcggtctttctcagctcgag
cgcgctgcggccttgccgaccttcaacgagtacggccagcgcgtcatcacgtaccaagcg
aagccgcacgagtaccacaaagcccgcacaaacctcccgaccatccgcacactcgacaag
attgaagtggtgcggcaggaggacgagattctcatctggtttgtcggtcagtccttcctg
cgccatcagatccgcaacatggtgagcgtgctcaaagcaggcgggcacggcctctgggac
gatcaggagctccagcacgcctttcagagcggcttcgaggtatcgcgcaagaagttcaag
cgcgagcgcctatctccagcacctgttcatggcctcacgctgtgggacgtcgagtacccc
gcgcagcaccggtcagactttgtaccctacgtagatgcgggaccttacgagcccgtggac
gtctcgacgcagcactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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