KEGG   Leishmania mexicana: LMXM_31_3380
Entry
LMXM_31_3380      CDS       T02288                                 
Name
(RefSeq) hypothetical protein
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
lmi  Leishmania mexicana
Brite
KEGG Orthology (KO) [BR:lmi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lmi03016]
    LMXM_31_3380
Enzymes [BR:lmi01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     LMXM_31_3380
Transfer RNA biogenesis [BR:lmi03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    LMXM_31_3380
 Prokaryotic type
    LMXM_31_3380
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-GeneID: 13453372
NCBI-ProteinID: XP_003878189
UniProt: E9B3C1
Position
31:1342658..1344817
AA seq 719 aa
MHLMVRWCFPHLRACANAPPSPRAADGISPGDNASVISCSLDLHYVLFCAALGCEAALCI
ARWSVGAQAERQGRSLSDEDRAELRKLFNSDDSEAWPGLGARTGAAAKELCCTSFDSLTE
AMRRQPPGASAMCTAAESMPLVSEKDVRRQVHELLRRFYPFVHCQVRGGRATLRFRTRPD
GGNETLTSDAAVRSIRSAGTGVGARRTRAEMEGQSGDASPLSTAPVSNSAAPAYVHIVVR
KRNLDTAEMRQLLGEYFGVKDSAVCVAGMKDKKAISVQRCSVPVAATDEAQSRVRALLTS
AAAVQPVTLRWPADPQQSYAVLLRASASSVPVHLGELSGNWFSLRVRDVRWAGEADRRMW
RSPATACENAQQQQQEEEEEGELRAFLQRRFVRCAEAGFINYFGQQRFSETVERVDDHTG
VHLFAARWVAAVRSLFRACPGVYNAFPDKMESRFVPSNSRDAQVMTHALRQTYRMYFSDC
PLSSADVQNESEVWTRLCEKAITEGVPFYLRSLWVHAGQSVFFNLAASYVASRGVARTEM
TAAAPPSGGSGGPQAASSASCTSSGSSTAEQPLAPLSCDVLASAQLPLGGYHVDRAAPDS
THLSGPASTVLWAQWKDAAIQHALRELRWTSAQGFEQRRVAGVPVPGSWRAVVARPTDAS
LVWGTEARPEARRRICSDGCGDASADAVYRSTIQLSFGLPSSCYATVFLREVLGCDKWW
NT seq 2160 nt   +upstreamnt  +downstreamnt
atgcacttgatggtgcgttggtgctttccccacctccgcgcttgcgccaatgcaccgccg
tcgccgcgtgccgctgacggcatctcgccaggtgacaacgcctctgtgatttcatgctcc
ctggacctgcattatgtgctgttttgcgcggcgcttggttgtgaggcagcgctgtgcatc
gcaaggtggtccgtaggggcacaggcagaacgccaggggcggagcttgagtgatgaggac
cgcgcagagctgcgcaagctcttcaacagcgacgacagcgaagcttggcctggtttgggg
gcgcgcacgggtgctgcagcaaaggagctgtgctgcacctctttcgactcgctgactgaa
gcaatgcggcggcagccaccaggtgcatcggcaatgtgtaccgctgcggagtcgatgccg
ctggtttccgagaaggatgtgcggcgacaggtgcacgagctgcttcgccgcttctatccg
tttgtgcattgtcaagtacgcgggggacgcgccaccctacgctttcgcactcgccccgac
ggcggcaacgagacgctaacgagcgatgcagctgtgcgctcgatacgcagcgccggcact
ggagtcggggctcggcgcacccgcgccgagatggagggccagtcaggggacgcgtcgccc
ctgtcgactgcaccggtgtccaacagcgctgctccagcgtatgtacacatcgttgtgaga
aagcgcaacttggacacggcggagatgcgccagctgctgggcgagtactttggcgtgaag
gacagcgccgtttgcgtggcaggcatgaaggacaaaaaggcgatctcggtgcagcggtgc
tctgtccctgtggccgccacagacgaagcgcagagtcgcgtacgcgcgctcttgacgagc
gccgcagctgtccagcctgtcacgctgcgctggccggcagacccgcagcagagctatgct
gtgctccttcgtgcgagtgcctctagtgtgccagtgcatctcggggagctttctggaaac
tggttctcgctacgtgttcgcgacgtgcgctgggctggcgaagcagatcgcaggatgtgg
cggtcgccggccacggcgtgcgagaacgcgcagcagcagcagcaggaggaggaggaagag
ggggagctccgagcatttctccagcgccgcttcgtgcgatgtgcagaggcgggcttcatc
aactactttggccaacagcgctttagtgagacggtggagcgcgtcgatgaccacactggc
gttcacctcttcgccgctcgctgggtagcggcagtccgcagcctgtttcgcgcgtgcccc
ggggtttacaacgcgttccccgacaagatggagtcgcgcttcgtgcctagcaactcgcgc
gacgcacaggtgatgacgcacgctctacggcagacgtatcgcatgtacttctccgactgc
ccgctcagcagtgccgacgtgcagaacgagagtgaggtgtggacgcgcttgtgcgagaag
gccatcacggagggcgtaccattctacctcagatccctgtgggtgcacgccggccagagc
gttttcttcaacctcgccgcctcctacgtggcctccaggggcgtggcaagaaccgaaatg
acagcggcagcaccgccctcgggcggcagcggtggcccccaggccgcttcttcagcgtcg
tgcacgagcagtggcagcagcacagccgagcagccactcgcgccgctctcctgtgacgtt
cttgcgagcgcgcagctgccgctcggtggctaccacgtggatcgagctgcgccggacagc
acccatctcagcggccccgcgtcgaccgtgctgtgggcgcagtggaaggacgccgccatc
cagcacgccttgcgggagctgcgatggacctcggcgcaagggtttgagcagcgtcgcgtg
gctggggtgccggtgcccggctcgtggcgcgcagttgttgcacgtcccaccgatgcctcc
ctcgtgtggggaacagaggcgaggcccgaggcgcgacggcgcatctgcagcgatggttgc
ggcgatgctagcgcggacgcagtgtaccgctctacaatccagctttcctttgggttgccc
tcgtcgtgctacgccactgtctttctgcgagaggtgctggggtgcgacaagtggtggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system