KEGG   Listeria monocytogenes J0161: LMOG_00490
Entry
LMOG_00490        CDS       T01987                                 
Name
(GenBank) excinuclease ABC C subunit
  KO
K03703  excinuclease ABC subunit C
Organism
lmj  Listeria monocytogenes J0161
Pathway
lmj03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lmj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    LMOG_00490
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lmj03400]
    LMOG_00490
DNA repair and recombination proteins [BR:lmj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LMOG_00490
SSDB
Motif
Pfam: UvrC_RNaseH_dom UVR GIY-YIG HHH_2 HHH_5 5_3_exonuc
Other DBs
NCBI-ProteinID: AEO03314
Position
1260285..1262096
AA seq 603 aa
MSSEHIQNKLALLPDQPGCYLMKDRQGTIIYVGKAKILKNRVRSYFSGTHDSKTQRLVQE
IVDFEYIVTSSNVEALLLEINLIKKHDPRFNIRLKDDKTYPFIKITNERHPRLIITRQVK
KDKGKYFGPYPNVYAANEVKRILDRLYPLRKCSTLPNKVCLYYHLGQCLAPCVFDVEASK
YKEMQDEIVAFLNGGYKTVKNDLMKKMQEAAENMEFEKAGEFRDQINAIETTMEKQKMTM
NDFVDRDVFGYAIDKGWMCVQVFFIRQGKLIERDVSQFPFYNDADEDFLTFIGQFYQKAN
HIPPKEIYLPDDVDSEAVQAVVPDTKIIVPQRGNKKDLVKLAYKNAKIALNEKFMLLERN
EERTVGAVERLGEAMGIPTPSRVEAFDNSNIHGTDPVSAMVTFLDGKPSKNDYRKYKIKT
VEGPDDYATMREVIRRRYWRVLKEGLPMPDLILIDGGKGQIDSAKDVLTNELGLDIPVAG
LAKDDKHRTSQLLFGDPLEIVPLERNSQEFYLLQRMQDEVHRFAITFHRQLRSKTGFQSI
LDGIPGVGPGRKKKLLKHFGSMKKLKEASIEEIKEAGVPLNVAEEVHKHITAFNEKAKNT
EQK
NT seq 1812 nt   +upstreamnt  +downstreamnt
atgtcttctgaacatatccaaaataaactagcgcttctgccagaccaacctggttgttat
ttgatgaaagatagacaaggaaccatcatttatgttgggaaagcaaaaattttaaaaaat
cgtgttcgctcttatttttcgggaacgcacgacagtaaaacgcaacgcttagtccaagaa
attgtggactttgaatatatagtaacatcatccaacgtagaagcattgctactagaaatt
aatttaattaaaaaacacgacccacgttttaatattcgcctaaaagatgataaaacttac
ccgtttattaaaatcacgaacgaacgacatccacgcctgattattacccgccaagtaaaa
aaagacaaagggaaatatttcggcccgtatccaaatgtctacgctgccaatgaagtaaaa
cgtattttagatcgtctgtatccattgcgtaaatgcagtacgttaccaaataaagtgtgt
ttgtactatcaccttggacaatgccttgccccgtgtgtatttgacgtggaagcaagtaag
tataaagaaatgcaagacgagatagtcgcattcctaaatggcggctataaaaccgtcaaa
aatgatttaatgaaaaaaatgcaagaagcagctgaaaatatggaatttgaaaaagcaggg
gaatttcgcgaccaaatcaacgcaatcgaaacaacgatggaaaaacaaaaaatgacgatg
aatgatttcgttgaccgtgatgtctttggttatgcaattgataaaggctggatgtgcgtc
caagtattcttcattcgtcaagggaaactgattgagcgcgatgtttcccaatttccattt
tataatgatgcggatgaagattttctcacttttattggtcaattttatcaaaaagccaac
catattccgcccaaagaaatatacttaccagatgatgtcgatagcgaagccgttcaagcc
gttgttcctgacacaaaaattatcgtcccacaacgcggcaacaagaaagatctcgtaaaa
cttgcttacaaaaatgcgaaaatcgcgctaaacgaaaaattcatgttacttgagcgcaat
gaagaacgtacagtcggcgcagtagaacgacttggagaagcaatgggaatcccaactcca
tcacgtgtcgaagccttcgataactcgaatattcacggtacagacccagtttccgcaatg
gtgacattccttgacggcaaaccaagtaaaaatgattaccgtaaatacaaaatcaaaacc
gtagaaggacctgatgattacgcaacgatgcgcgaagttatccgccgccgttactggcga
gtgcttaaagaagggctaccaatgcctgatttaatcttaattgatggtggtaaaggacaa
attgacagtgccaaagatgtcctaacgaatgagctaggcttagatattccagtagcagga
cttgcaaaagacgacaaacaccgcactagtcaactattatttggggatccattagaaatt
gttccactcgaaagaaacagccaagaattctatttgctacagcgcatgcaagatgaagtc
catcgttttgccattacattccaccgtcaactccgtagcaaaactggcttccaatccatt
cttgacggcatcccaggagtaggacccggtcgcaagaaaaaattgcttaaacacttcggc
tccatgaaaaaattaaaagaagcatctatagaagaaattaaagaagccggtgtccctttg
aatgttgctgaggaagtgcataaacacatcacagcattcaatgaaaaagcaaaaaatacc
gagcaaaaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

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