KEGG   Listeria monocytogenes L99 (serotype 4a): lmo4a_1999
Entry
lmo4a_1999        CDS       T01989                                 
Name
(GenBank) ATP-dependent DNA helicase, putative
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
lml  Listeria monocytogenes L99 (serotype 4a)
Pathway
lml03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lml00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    lmo4a_1999
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lml03019]
    lmo4a_1999
   03400 DNA repair and recombination proteins [BR:lml03400]
    lmo4a_1999
Enzymes [BR:lml01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     lmo4a_1999
Messenger RNA biogenesis [BR:lml03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     lmo4a_1999
DNA repair and recombination proteins [BR:lml03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      lmo4a_1999
SSDB
Motif
Pfam: DEAD Helicase_C ResIII RecQ_Zn_bind AAA_22
Other DBs
NCBI-ProteinID: CAR84703
Position
complement(2029923..2031326)
AA seq 467 aa
MNLEQELKEYLGFDAFRPGQKEVIETALAKRNCFAMLPTGTGKTICYQLAGHLMEGLVLI
VSPLLSLMQDQMERMRAHGEKRVAALNSFLKREEKSQILANIHLYKFIFLSPEMLNNEAV
KNLLLKQKISLFVIDEAHCISQWGHDFRPDYLMLGQFIKEANFPVTMVLTATATKKVRVD
ILTQLHLTDCEQIIYSVNRPNISLQVEKFSSQQLKKERLYELVRKLQTPGIIYFSSKKLA
ESIAHELSEIAELRVAYYHGDMDTEDRIIIQQQFVYGQLDIICATSAFGMGIDKADIRFV
IHYHMPADLEAYLQEIGRAGRDGKDSVAILLYANGDEFIQMQLADQDIPDANLMNLTNEQ
RKTLPETEQRFIEYYQRSGLSTKELTAKMNYRKKWKRANLQQFIGYLHTEDCRRNYILRY
FEETPIEATPENCCDLDGAEITYFEKREKIQLKEIPTWEAYLSYLLQ
NT seq 1404 nt   +upstreamnt  +downstreamnt
gtgaatttagaacaggaattaaaagaatatcttggatttgatgcgtttcgccctggtcaa
aaagaagtaattgaaacagctttggccaaacggaattgtttcgccatgttacctactgga
acgggaaaaaccatttgttatcaattagccggccatttgatggaggggttagttttgatt
gtttcaccgctactttccctcatgcaagaccaaatggagcgaatgcgtgctcacggagaa
aagcgagtggcggcactgaatagctttttaaaacgagaagaaaaaagccaaatccttgcg
aacattcatttatataaatttatttttttatcaccagaaatgctaaataatgaagctgtg
aagaatctattattaaaacaaaaaatcagtttgtttgttatagatgaagcacattgtatt
tcgcagtggggccatgattttcgacctgattatttaatgttaggtcaatttattaaagag
gctaatttcccagtgactatggtgcttactgctacggcgacgaagaaggttagggtggac
attttaacgcaactgcacttaacggattgtgagcaaatcatttattcggtgaatcggccg
aatatttctttacaagtggagaaattttctagccagcagctgaagaaagaacgtttatat
gagcttgtacgcaaactgcaaacgccgggaattatttatttttccagtaaaaaattagca
gaaagtatagcgcatgaattaagcgaaattgccgaattgagggtcgcttattatcacggt
gatatggacacggaagataggattattattcagcaacaatttgtatatggacagttggat
attatatgcgccactagcgcttttgggatgggaatagataaagcagatattcgttttgtg
attcattatcatatgccagctgatttggaagcttatttgcaagaaattggtcgagctggg
cgcgacggcaaggatagtgttgcgattttactttatgcgaatggagatgaattcattcaa
atgcagttagcagatcaagacataccagacgccaatttaatgaacttgacgaatgagcaa
cggaaaacattgccggaaacagagcagcgtttcattgagtattaccaacgaagcggttta
agtacgaaagaattgaccgccaaaatgaattatcgcaaaaaatggaaacgagctaattta
caacaatttatcggctaccttcatacagaagactgccgtcgcaattacattttgcgctac
tttgaagaaacgccaatagaagccacaccagaaaattgttgtgacttggatggggcagaa
ataacctattttgagaaacgagaaaaaatacagctgaaagaaattccaacatgggaagcc
tatctatcctatttactccagtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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