KEGG   Listeria monocytogenes L99 (serotype 4a): lmo4a_2670
Entry
lmo4a_2670        CDS       T01989                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
lml  Listeria monocytogenes L99 (serotype 4a)
Pathway
lml03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:lml00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    lmo4a_2670 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lml03021]
    lmo4a_2670 (rpoA)
   03400 DNA repair and recombination proteins [BR:lml03400]
    lmo4a_2670 (rpoA)
Enzymes [BR:lml01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     lmo4a_2670 (rpoA)
Transcription machinery [BR:lml03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     lmo4a_2670 (rpoA)
DNA repair and recombination proteins [BR:lml03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      lmo4a_2670 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L HHH_5 DUF961 flgE_D3
Other DBs
NCBI-ProteinID: CAR85374
Position
complement(2718015..2718959)
AA seq 314 aa
MIEIEKPKIETIEISDDAKYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSIQIDG
ALHEFSVIEGVVEDVTTMILNIKKLALKIYSDEEKTLEIDMQGPGVVTAADINYDSDVEI
LNPDLHIATLSDNAKFHVRLNATRGRGYTPADQNKRENMPIGVLPVDSIFSPVIRVNYQV
ENTRVGQSTNYDKLTFDVLTDGSISPEEAVSLGAKILSEHLSIFVNLTDEAQKAEIMIEK
EESHKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELADKSEDDMMKVRNLGRKSLEEVK
VKLADLGLSLRNEN
NT seq 945 nt   +upstreamnt  +downstreamnt
atgatcgaaattgaaaagccaaaaatcgagacgattgagatcagcgatgatgccaagtat
ggaaagtttgttgtagagccacttgagcgtggatatggtacaactttgggtaactcctta
cgtcgtattctattatcttctcttccaggtgcagcagtaacctctatccaaattgatgga
gctttacatgagttttctgtaattgaaggtgtagtagaagatgtaacaaccatgatttta
aatatcaaaaaacttgcgctaaaaatctattctgatgaagaaaaaacattagaaatcgat
atgcaaggtcctggtgtagtgactgcagctgacattaattatgacagcgatgttgagatt
ttaaatcccgacttacacattgctacattaagtgataatgctaaatttcatgtgcgttta
aatgcgactcgtggtcgtggttacacacctgctgatcaaaataaacgcgaaaatatgcca
attggtgtacttccagtcgattcaatcttttcaccggttatccgtgtgaactatcaagtg
gaaaatacacgtgttggacaatcaactaattatgataagcttacgtttgatgtgttgact
gacggaagtatcagcccagaagaagcagtttcacttggagctaaaattctttctgagcat
ttaagtatcttcgttaacttaacagatgaagcacaaaaagctgaaattatgattgaaaaa
gaagaaagccataaagagaaagtgcttgaaatgactattgaagaattagacttgtctgtt
cgttcatataattgtttgaaacgcgctggaatcaatacagtacaggaacttgctgacaaa
tccgaagacgatatgatgaaagtccgtaacttgggccgtaaatcgcttgaggaagttaaa
gtaaaactggctgaccttggcttatctctaagaaacgaaaactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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