KEGG   Listeria monocytogenes EGD-e (serotype 1/2a): lmo1574
Entry
lmo1574           CDS       T00066                                 
Symbol
dnaE
Name
(RefSeq) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
lmo  Listeria monocytogenes EGD-e (serotype 1/2a)
Pathway
lmo03030  DNA replication
lmo03430  Mismatch repair
lmo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lmo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    lmo1574 (dnaE)
   03430 Mismatch repair
    lmo1574 (dnaE)
   03440 Homologous recombination
    lmo1574 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lmo03032]
    lmo1574 (dnaE)
   03400 DNA repair and recombination proteins [BR:lmo03400]
    lmo1574 (dnaE)
Enzymes [BR:lmo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     lmo1574 (dnaE)
DNA replication proteins [BR:lmo03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     lmo1574 (dnaE)
DNA repair and recombination proteins [BR:lmo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     lmo1574 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon POT1 tRNA_anti_2 DUF655 Transcrip_reg
Other DBs
NCBI-GeneID: 986993
NCBI-ProteinID: NP_465099
Pasteur: LMO01574
UniProt: Q8Y6V7
Position
complement(1613497..1616823)
AA seq 1108 aa
MGFVHLQVASAYDLLSSTASIDKLIAKAKEYHYPALAITDKNVLYGVVEFYQKCLAADIK
PIIGMTVTIQGYLNPINSYELILIAESTAGYHQLLKIASAIQTREEGPELPQSWLRAYSS
DLIVISPGAKGEIERLLMEEDREGALEVYANLVEIFGKESVYLSAQKENPRLFAKIETFS
SEENVPVVATKNVQYLEPKDAQAKEVLTAIRDNRTVDWTTLPLAGPNYFTSQDEMERDWQ
TAFEKQACLETGELANRCHVEIALDQHLLPRFPLNEGQNASDVLRQTAFAGLKERNLLGM
EYQERLEYELKVITEMGFADYFLIVWDVIRYSREAGVLTGPGRGSAAGSLVSYALRITDV
DPIRYNLLFERFLNPERITMPDIDLDFPDNRRDEVISYVVSKYGEAHVAQIGTFGTLAAK
AAIRDTARSFGLNSVLLSEWSKLIPSQLGITLQKALQESPRLENHIKSSKENEMIWEVAC
QLEGLPRHISTHAAGIVISDKPLVEQVALQLGSGDARLTQFAMGELEKIGLLKMDFLGLR
NLSLLDRVLKSVNYTRETPLTLADISLEDKKTLKLFQTGDTTGVFQFESDGIRRVLRKLK
PTSFEDVVAVDALYRPGPMEQIDTFIARKHGKEKIQYPHPDLASILEVTYGVIVYQEQII
QVANQMAGFSLGEADLLRRAVSKKKADVLNEERIHFVEGAKSKGYSEASANQVYDMIVQF
ANYGFNRSHAAAYSKIAFQLAYLKAHFPAAFMSSLLSSVFGNDDKISQYITEAKNYGISM
LAPSINHSNYYFQMENETSIRYSFRVIRKVPTKFILEIINERKKAPFRDFFDFCERMPHK
MLSETVLEALVFSGCFDEFGEDRATILATIDAVLQYISLLGEDSKGMNLFAEDDEFLKKM
KPRYRKTAPISIDEKLEKEKLYTGQYVSAHPVSYYQNKLQNLAITRLANLSSGKNYQVAA
YVHEVKSIRTKKGETMCFLTISDDSKELSAVMFPECYRKFANFAQKGEILFLQVKADTRN
GELQLIINKAEDLKEIKAPVRLFLKLTEPQQMEQIKPILARYKGDSKVIVHQAITKQTAE
LKNIQVTPSNELQEALGELLGKENVVIK
NT seq 3327 nt   +upstreamnt  +downstreamnt
gtggggtttgttcatttacaagttgcgagcgcttatgatttgctatctagtacagcgtcc
atcgataagctaatcgctaaagcaaaagaataccattatccagccttagcaattacggat
aaaaatgtactttacggagtagtcgagttttatcaaaagtgtttagcggcggatataaaa
ccaattatcgggatgacggtgacaatacaaggttacttaaatccaattaattcatatgag
ttgatattaattgcggaatcaaccgctggatatcaccagttattaaaaattgcgagtgct
attcaaacgcgcgaagaaggaccggaattaccacaaagctggttacgagcttatagcagc
gatttgattgttatttcacctggtgccaaaggagaaatcgaacgacttctgatggaggag
gatcgcgagggagcactagaagtttatgcaaatttagtcgaaatttttggtaaagaatct
gtttatttatctgcccaaaaagaaaatccacgtcttttcgcaaaaatagaaactttttct
tcagaagaaaatgtaccggttgttgcgacgaaaaatgtacaatatttagagccaaaagat
gcgcaagcgaaagaagttttaacggccattcgtgataatcgaacagttgactggacgact
ttgccacttgccggaccaaactactttacctcgcaagatgaaatggaacgtgactggcaa
acagctttcgaaaagcaagcgtgtcttgaaacgggagaactcgcaaaccgttgtcatgtc
gaaattgctctggatcaacatttattaccaagatttccgttaaatgaaggacaaaatgca
tcagatgttttgcgtcaaacagcctttgcgggattaaaagaacgaaatttactagggatg
gaatatcaggaacgcttagaatatgaattgaaagttattacagagatggggtttgcagat
tactttctgatagtttgggatgttattcgttattcgcgtgaggcaggagttttaacaggt
ccaggtcggggttctgcggcggggtcccttgtttcctatgcacttagaattacggatgta
gacccgattcgatacaatttgctgtttgagcgatttttaaacccagaacgtatcacgatg
cccgatattgatttggattttccagataatcgccgggatgaagtgatttcgtatgtggta
tctaaatacggagaagcacatgtggcgcaaattggcacatttggaacattggctgctaaa
gcggcgattcgtgatactgcacggagttttggcttgaattccgtactattatcagaatgg
tctaagttaattccgagtcaattaggcattacgctgcaaaaagcattgcaagaaagtccg
cgtttagaaaatcatattaaaagttcaaaagaaaacgaaatgatttgggaagttgcttgt
cagctggaaggcttgccgcgtcatatttcaacgcatgcagcggggatagtaattagtgat
aagccactcgtagaacaagttgcgctacaattgggtagtggagacgcacgtttgacccag
tttgccatgggagaattagagaagattggcttacttaaaatggattttctaggacttaga
aatcttagtttactcgatcgtgttttgaaatcagtcaattatactagagaaactccgtta
acattagcagatatttctttagaggataaaaaaacattgaaactattccaaacaggcgac
acgacaggggtattccaatttgagtcagatgggattcgccgcgtgctccgaaaattaaag
ccaacttcttttgaagatgttgtggcagtagatgcgctttatcgtccgggtccaatggaa
caaattgatacgtttatcgctagaaaacacggaaaagaaaaaattcagtaccctcatcca
gatttagcgtctattttagaagtgacatacggcgttatcgtttaccaagaacaaattatt
caagtggcaaaccaaatggctggattttctcttggagaagcagatttgttaagacgagct
gttagcaagaagaaagcggatgtcctaaacgaggagcggattcactttgtagaaggcgct
aagagtaaaggctattcagaagctagcgctaaccaagtatatgatatgattgtccaattc
gcgaactacggtttcaacagaagtcacgcagcggcctattcaaaaatcgcttttcaatta
gcttacttaaaagcacattttccagccgcgttcatgtcatcacttctcagctcagttttc
ggaaacgatgacaaaatttcccaatacattacagaagcaaaaaactacggaattagcatg
ttagcgccaagcatcaaccatagtaactactacttccaaatggaaaatgagacatctatt
cgttatagtttccgtgttattcgtaaagtgccaaccaaatttattttagaaattattaac
gaacgaaaaaaagcgcctttccgagatttctttgatttttgtgaaagaatgccacataaa
atgctctcagaaactgttttagaagcactcgtattttctggttgttttgacgaatttggt
gaagaccgggcaacgattttggcaacaattgatgcggtattacaatatatctcgttactc
ggtgaagattcgaaagggatgaatcttttcgcggaagatgacgaatttttgaagaagatg
aaaccgagatatcggaaaaccgcacccatttcaattgatgaaaagctggagaaagaaaaa
ttatacactgggcaatacgtttcagcgcatccagtatcgtactatcaaaataaattacaa
aaccttgctattacaagacttgcaaatctttcttccggcaaaaattatcaagtggctgct
tatgtacacgaagtcaaatcaattagaacaaaaaaaggcgaaacgatgtgctttttaaca
attagtgatgattcaaaagaattgagcgccgttatgtttccggaatgttaccgtaaattc
gctaactttgcacaaaaaggagagatcctctttttgcaagtgaaagcagatacgagaaac
ggggaactccaattaattattaataaagcagaagatttaaaagaaattaaagccccggta
cgattattcctaaaattaacggaaccacagcaaatggaacaaattaagccgattttagcg
cgttataaaggcgacagtaaggtcattgtgcatcaagcgataacgaaacaaactgctgaa
ctgaaaaatattcaagtaacgccatcaaatgagctgcaagaagctttaggagagttgctt
ggtaaagagaatgtagttattaagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PASTEUR (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (53)   

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