KEGG   Listeria monocytogenes N53-1 (serotype 1/2a): BN419_1828
Entry
BN419_1828        CDS       T02513                                 
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
lmob  Listeria monocytogenes N53-1 (serotype 1/2a)
Pathway
lmob03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:lmob00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BN419_1828
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lmob03400]
    BN419_1828
Enzymes [BR:lmob01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     BN419_1828
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     BN419_1828
DNA repair and recombination proteins [BR:lmob03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     BN419_1828
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS NFACT_N Ribosomal_S13 Auto_anti-p27
Other DBs
NCBI-ProteinID: CCQ24145
Position
complement(1495351..1496172)
AA seq 273 aa
MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGKF
LLFDLTNCTILSHLRMEGKFRLMDENEEVSKHTHIIFHFEDHTELRFLDVRKFGTMEVTN
KYGEGETRSIKKLGPEPLTQAFTLTDFATGVKKTSRTIKTALLDQKLVAGVGNIYADEIC
FEAKVRPERAANSLSDKEIKRIFKATKSIMTEAVALGGSTVRTYVNSQGKLGQYQNKLKV
YGKTDEPCVVCGTPIEKIKLNGRGTHFCPNCQK
NT seq 822 nt   +upstreamnt  +downstreamnt
atgccagaaatgccggaagtagaaaatgtccgcgcaacattacaagaattagtcccaggt
aaaaaaatagatcaagtaatagttcgtgttccaaaaatgattgtctcaacaccacccgat
gagtttgtgcatatgcttgtcgggcaagaaatagagggtgtgcgccgtcgtggtaaattc
ttactttttgacttaaccaactgtacgattttatcgcatttacggatggaaggtaaattt
cggttaatggatgaaaatgaagaggtcagcaagcatacgcatattatttttcattttgag
gatcacacggaattgcgttttttagatgtgcgaaaatttggtacgatggaagtaacgaat
aaatacggtgagggtgagactcggtcgattaaaaagcttggcccagaaccgctgacgcaa
gcttttacactaacggattttgcaactggtgtgaaaaaaacaagccgcaccatcaaaacg
gctttacttgatcaaaagttagtagcgggagttggaaatatttatgcggatgaaatttgt
tttgaagcaaaagtacgaccggaaagagcagctaactcactttcagacaaagaaattaaa
cgtatttttaaagcgacgaaaagtattatgactgaagctgtagcacttggtggctccact
gttagaacgtatgtgaattcgcaaggtaagcttggacaatatcaaaataaattaaaagta
tacggcaaaacagacgagccgtgtgttgtttgtggaacgccgattgaaaaaatcaaatta
aatggacgtgggacacatttttgcccgaattgccaaaaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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