KEGG   Listeria monocytogenes WSLC1042 (serotype 4b): AX24_03655
Entry
AX24_03655        CDS       T03151                                 
Name
(GenBank) RNA helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
lmox  Listeria monocytogenes WSLC1042 (serotype 4b)
Pathway
lmox03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lmox00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AX24_03655
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lmox03019]
    AX24_03655
   03009 Ribosome biogenesis [BR:lmox03009]
    AX24_03655
Enzymes [BR:lmox01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     AX24_03655
Messenger RNA biogenesis [BR:lmox03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     AX24_03655
Ribosome biogenesis [BR:lmox03009]
 Prokaryotic type
  rRNA helicases
   AX24_03655
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII CMS1 AAA_19 UvrD-helicase
Other DBs
NCBI-ProteinID: AHJ35312
Position
662898..664310
AA seq 470 aa
MNNLKLSEEIKRAINELGYTEATPVQKAVIPVALTGEDIVAKSQTGSGKTAAFAIPIAEQ
IEWEENKPQALIIVPTRELAMQVKTECTNIGRFKRVKAAAIYGQSPFAKQKLELSQKNHI
VVGTPGRLLDHIEKGSLNVDKVAHLVLDEVDEMLSMGFIDQVEDILSRLPKQRQNLFFSA
TMPEEMQDLIKRYQDDPMVIEMASEKTNPIFHVEMQTDNKEKTLKDVLITENPDSAIIFC
NTKNQVDELTDLLDVKVSKIHGGLRQEDRFRAMDDFKSGKSRFLIATDVAGRGIDVDNVS
LVINYDLPIEKENYVHRIGRTGRAGKSGKAISFVKTNENPLLRDIEEMLDVTIEKKRKPT
VIEVKANEEAFRKKQQKRPTIKKARGEKLNKNIMKLYFNGGKKKKIRAVDFVGTISKLEG
ITAEDIGIITIEDHVSFVEILNGKGPAVLEMMRSRKVKGRRLKVNEARKR
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgaataatttaaaattaagtgaagaaattaaaagagcgattaatgaactaggatataca
gaagcaacacccgttcaaaaagcggtaattccagttgccttaacaggagaagatattgtt
gctaaatcacaaactggtagtgggaaaacagcagcattcgctattcccattgcagaacag
attgaatgggaagaaaataagccacaagcactaatcatcgttccaacacgagaacttgca
atgcaagtcaagacagaatgtacgaatattggacgatttaaacgtgtcaaagctgcagca
atatacggacaatcaccatttgcgaaacaaaaattagaactaagccaaaaaaatcatatc
gtcgttggtacgccaggtcgcctactggaccatattgaaaaaggatcactgaatgtcgac
aaggttgcccatttagttttagatgaagtagatgaaatgttaagcatgggatttattgat
caagtcgaagatattcttagccgtttaccaaaacagcgccaaaatctatttttctcagca
actatgccagaagaaatgcaagatttgattaaacgctaccaagatgatccaatggtaatc
gaaatggcatcggaaaaaacaaaccctatcttccacgtggagatgcaaacagataataaa
gaaaaaacgctaaaagatgttttgattacagaaaatccggatagcgcaataatattttgc
aatacgaaaaatcaagtcgatgaactcaccgatttacttgatgtaaaagttagtaaaatt
catgggggtttaagacaagaagaccgtttccgagcaatggatgattttaaaagtggcaaa
tcccgtttcttaattgcgacagatgtggcagggcgcggaatagatgtggataatgtatcg
ttagtcattaactacgatttaccaattgaaaaagaaaattatgtacatcgtatcggtcgt
actggtcgcgctggcaaaagtggtaaagctattagtttcgtgaaaacaaatgaaaatcca
cttttgcgtgacatagaagaaatgctcgatgttacaatcgaaaaaaaacgtaaaccgaca
gtgatagaagtgaaagctaacgaagaagctttccgcaaaaaacaacaaaagcgcccaaca
atcaaaaaagctcgtggggaaaaattaaataaaaacattatgaaactgtattttaatggt
ggaaaaaagaaaaaaattcgtgcagtagattttgttggaactatttctaaattagaagga
attacggccgaagatatcggaattattacgattgaagaccatgtttcttttgttgaaatt
ttaaatggaaaaggtccggcagtactggaaatgatgcgctctcgtaaagtaaaaggtaga
cgcctgaaagtaaacgaggccagaaaacgataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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