KEGG   Listeria monocytogenes M7 (serotype 4a): LMM7_2035
Entry
LMM7_2035         CDS       T01988                                 
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
lmq  Listeria monocytogenes M7 (serotype 4a)
Pathway
lmq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lmq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LMM7_2035 (recQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lmq03019]
    LMM7_2035 (recQ)
   03400 DNA repair and recombination proteins [BR:lmq03400]
    LMM7_2035 (recQ)
Enzymes [BR:lmq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LMM7_2035 (recQ)
Messenger RNA biogenesis [BR:lmq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     LMM7_2035 (recQ)
DNA repair and recombination proteins [BR:lmq03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      LMM7_2035 (recQ)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII RecQ_Zn_bind AAA_22
Other DBs
NCBI-ProteinID: AEH93040
UniProt: A0A0E0UYI1
Position
complement(2027847..2029250)
AA seq 467 aa
MNLEQELKEYLGFDAFRPGQKEVIETALAKRNCFAMLPTGTGKTICYQLAGHLMEGLVLI
VSPLLSLMQDQMERMRAHGEKRVAALNSFLKREEKSQILANIHLYKFIFLSPEMLNNEAV
KNLLLKQKISLFVIDEAHCISQWGHDFRPDYLMLGQFIKEANFPVTMVLTATATKKVRVD
ILTQLHLTDCEQIIYSVNRPNISLQVEKFSSQQLKKERLYELVRKLQTPGIIYFSSKKLA
ESIAHELSEIAELRVAYYHGDMDTEDRIIIQQQFVYGQLDIICATSAFGMGIDKADIRFV
IHYHMPADLEAYLQEIGRAGRDGKDSVAILLYANGDEFIQMQLADQDIPDANLMNLTNEQ
RKTLPETEQRFIEYYQRSGLSTKELTAKMNYRKKWKRANLQQFIGYLHTEDCRRNYILRY
FEETPIEATPENCCDLDGAEITYFEKREKIQLKEIPTWEAYLSYLLQ
NT seq 1404 nt   +upstreamnt  +downstreamnt
gtgaatttagaacaggaattaaaagaatatcttggatttgatgcgtttcgccctggtcaa
aaagaagtaattgaaacagctttggccaaacggaattgtttcgccatgttacctactgga
acgggaaaaaccatttgttatcaattagccggccatttgatggaggggttagttttgatt
gtttcaccgctactttccctcatgcaagaccaaatggagcgaatgcgtgctcacggagaa
aagcgagtggcggcactgaatagctttttaaaacgagaagaaaaaagccaaatccttgcg
aacattcatttatataaatttatttttttatcaccagaaatgctaaataatgaagctgtg
aagaatctattattaaaacaaaaaatcagtttgtttgttatagatgaagcacattgtatt
tcgcagtggggccatgattttcgacctgattatttaatgttaggtcaatttattaaagag
gctaatttcccagtgactatggtgcttactgctacggcgacgaagaaggttagggtggac
attttaacgcaactgcacttaacggattgtgagcaaatcatttattcggtgaatcggccg
aatatttctttacaagtggagaaattttctagccagcagctgaagaaagaacgtttatat
gagcttgtacgcaaactgcaaacgccgggaattatttatttttccagtaaaaaattagca
gaaagtatagcgcatgaattaagcgaaattgccgaattgagggtcgcttattatcacggt
gatatggacacggaagataggattattattcagcaacaatttgtatatggacagttggat
attatatgcgccactagcgcttttgggatgggaatagataaagcagatattcgttttgtg
attcattatcatatgccagctgatttggaagcttatttgcaagaaattggtcgagctggg
cgcgacggcaaggatagtgttgcgattttactttatgcgaatggagatgaattcattcaa
atgcagttagcagatcaagacataccagacgccaatttaatgaacttgacgaatgagcaa
cggaaaacattgccggaaacagagcagcgtttcattgagtattaccaacgaagcggttta
agtacgaaagaattgaccgccaaaatgaattatcgcaaaaaatggaaacgagctaattta
caacaatttatcggctaccttcatacagaagactgccgtcgcaattacattttgcgctac
tttgaagaaacgccaatagaagccacaccagaaaattgttgtgacttggatggggcagaa
ataacctattttgagaaacgagaaaaaatacagctgaaagaaattccaacatgggaagcc
tatctatcctatttactccagtag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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