KEGG   Listeria monocytogenes M7 (serotype 4a): LMM7_2593
Entry
LMM7_2593         CDS       T01988                                 
Symbol
rho
Name
(GenBank) transcription termination factor
  KO
K03628  transcription termination factor Rho
Organism
lmq  Listeria monocytogenes M7 (serotype 4a)
Pathway
lmq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lmq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LMM7_2593 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lmq03021]
    LMM7_2593 (rho)
   03019 Messenger RNA biogenesis [BR:lmq03019]
    LMM7_2593 (rho)
Transcription machinery [BR:lmq03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     LMM7_2593 (rho)
Messenger RNA biogenesis [BR:lmq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     LMM7_2593 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N ATPase_2 OB_RNB NACHT AAA_25 AAA_22 AAA Spore_III_AA Mor
Other DBs
NCBI-ProteinID: AEH93598
UniProt: A0A0E0UZQ5
Position
complement(2608416..2609687)
AA seq 423 aa
MAKLSIAYLESLTIKEIYALAKEHKIAYYSKLTKRELIFALLKSNAEKEGFFFMEGVLEI
IPNEGFGFLRPINYSSSSEDIYISASQIRRFELRTGDKVSGKVRPPKENERYFGLLHVEA
VNGENPEVAKERVHFPGLTPLYPDRQIHLETGKNPISTRTIDLISPIGFGQRGLIVAPPK
AGKTVLLKEIANAITTNHPESELIVLLIDERPEEVTDIERSVKADVVSSTFDEVPENHIK
VAELVLERAMRLVEQKRDVVILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFF
GAARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRQLAERRVFPAIDMR
RSGTRKEELLLSKERLEQLWKIRKAMPKQSDGLDISERFVRYLKKTENNEAFYELLQEEM
FKK
NT seq 1272 nt   +upstreamnt  +downstreamnt
atggctaaactgtccattgcatacttagaaagtttaacaataaaagagatctatgcttta
gcaaaagaacacaaaattgcctattatagcaaattaactaaacgagaattaatttttgct
ttattaaaatcaaacgcagaaaaagaaggatttttcttcatggaaggtgtattagaaatt
atcccaaatgaaggttttggcttcttacgtccaatcaactattcttccagctcagaagat
atttacatttcagcttcccaaattagacgtttcgagttaagaactggggataaggtttct
ggaaaagttcgtcctccgaaagaaaatgaacgttattttggtttactccatgtcgaggct
gtcaatggagaaaacccagaagtggctaaagaaagagtgcatttcccagggctaacaccg
ctttatccagatcgtcaaattcatttagaaacaggcaaaaatcctatttccacaagaacg
attgatttgatttcaccaattggttttggtcaacgtggacttattgtagctccgccaaaa
gcaggtaaaacggtattacttaaagaaattgcgaacgcgattactactaatcatccagag
tcagaattgattgtcttgttaattgatgagcgtccggaagaagtaactgatatcgaacgt
tctgtaaaggccgatgttgtcagttccacatttgatgaagtacctgaaaatcacattaaa
gtagcagaactggttcttgaacgagcgatgcgtttagtagaacaaaaacgtgatgtggtc
attttaatggatagtattacgcgacttgcgagagcctataacctagtgattccgccaagt
ggtcgaacgctttccggggggattgatcctgctgcattccatagaccgaagcgcttcttt
ggagctgctcgtaatattgaagaaggtggaagcttaaccattcttgccacagcattagtt
gacacgggttctcgaatggacgacgttatttacgaggaattcaaaggaacggggaacatg
gaattacacctcgatcgccaacttgccgaacgccgcgttttcccggcaatcgatatgcgc
cgttctggaacaagaaaagaagagctactcctatccaaagagcgcttagaacaactttgg
aaaatccgcaaagcaatgccaaaacaaagcgatggactagacatttcagaacgtttcgta
cgctatctgaagaaaacagagaataatgaagctttttatgaattattgcaagaagagatg
tttaaaaaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (20)   

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