KEGG   Listeria monocytogenes Finland 1998: LMLG_1764
Entry
LMLG_1764         CDS       T01986                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
lms  Listeria monocytogenes Finland 1998
Pathway
lms03030  DNA replication
lms03410  Base excision repair
lms03420  Nucleotide excision repair
lms03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lms00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LMLG_1764
   03410 Base excision repair
    LMLG_1764
   03420 Nucleotide excision repair
    LMLG_1764
   03440 Homologous recombination
    LMLG_1764
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lms03032]
    LMLG_1764
   03400 DNA repair and recombination proteins [BR:lms03400]
    LMLG_1764
Enzymes [BR:lms01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LMLG_1764
DNA replication proteins [BR:lms03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     LMLG_1764
DNA repair and recombination proteins [BR:lms03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     LMLG_1764
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LMLG_1764
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc HHH_5 LTD Enkurin XPG_I HHH_2 FeoB_N
Other DBs
NCBI-ProteinID: AEO39094
Position
complement(1581945..1584572)
AA seq 875 aa
MNKLVLIDGNSIANRAFYALPLLNNDKGVYTNAVYGFAMMLMNVLEKEKPSHVLVAFDAG
KTTFRHTTFKGYKGGRQKTPSELSEQFPFIRELLTAYDIPQYELANYEADDIIGTLTKKA
EADGMEVAIITGDRDLTQLASEKTTVYITKKGIADMETNTPETLKEKYNLTPEQIIDMKG
LMGDSSDNIPGIPGVGEKTALKLLHEFGGTVESVLEHAEEISGKKLKEKVLENKELAILS
KELATINVDSPIECTVESTKYDGYQTEKVIPLLKEMNFTTLLKNIEGDTPEESKELKELS
FEIVTELKEQHFGGKTALYVELENDNYHTANFIGLTVHSSQGTYFFTKETAESSEAFRKW
VESDQTKVVYDAKKTIVAMNRIGLAISGITFDIMLASYLLNPSDSIDDFTSVAVRHDYTE
VETDEAVYGKGAKRSTPEESIVAAHLARKAVAIADLEKRLVDDLEKNEQLALMEDLELPL
TFVLAEMEMQGVSVDTDRLEDMKVELGGRLKTLEASIHSLAGEEFNINSPKQLGVILFEK
LELPPVKKTKTGYSTAADVLESLSGKHAIIDEILLYRQLGKIQSTYIEGLLKVTDKETHK
VHTRFNQTLTQTGRLSSVDPNLQNIPIRLEEGRKIRQVFVPSKPGWKMFSADYSQVELRV
LAHISEDENLIYAFKHDYDIHTKTAMDVFHVEKEEVDSLMRRQAKAVNFGIVYGISDYGL
SQNLGITRKEAKDFIDRYFVSYPAVKEYMQDIVRFAKEKGYVETILHRRRYIPEIVSRNF
NVRGFAERTAMNTPIQGSAADIIKKAMILMSERLVSEKLEAKLLLQVHDELIFEAPEAEI
AKLEEIVPDVMENAVELSVPLKVDSAFGDTWYDAK
NT seq 2628 nt   +upstreamnt  +downstreamnt
gtgaataaattagtattaattgatggaaatagtattgcgaatcgcgctttttatgcgtta
ccacttttaaataacgataaaggtgtttacacaaatgcggtgtatggattcgcaatgatg
ttgatgaatgtactcgaaaaagaaaaacccagccatgtgctcgttgcatttgatgctgga
aaaacaacttttagacatacaacatttaaaggttataaaggcggacgtcaaaaaacccca
agtgagttatctgaacagtttccattcatccgagagcttttaacggcgtatgatatcccg
caatatgaactggccaattacgaggcagacgatattatcggaacattgacgaaaaaagcg
gaagcagatggaatggaagttgcaattattaccggagaccgcgatttaacacaattagct
tctgaaaaaacaacggtttatattactaaaaaaggcatagccgatatggaaaccaacaca
ccagaaacactaaaagaaaaatacaatctaactcctgaacaaatcattgatatgaaaggt
ttaatgggagattcctccgataatattcctgggattccaggcgttggtgaaaaaacagcc
ttaaaactcttacatgaatttggcggaacggtggaaagtgtgttagagcacgccgaggaa
atttccggtaaaaaactaaaagaaaaagtactagaaaataaagaattagctattttaagt
aaagagctagctacaatcaatgtggattcaccgattgaatgcacagtcgaaagcacgaaa
tatgacgggtatcaaactgaaaaagttatccctttattaaaagaaatgaattttacaaca
cttttgaaaaatatcgaaggagatacaccggaggaatcgaaagaactaaaagaattgtct
tttgaaatagtaacggaattaaaagaacaacattttggtgggaaaaccgcactttatgtg
gagctggaaaatgataattaccatacagcaaacttcatcgggctgacagtacattccagc
caaggaacgtatttctttacaaaagaaacagctgaaagtagtgaggcattccgcaaatgg
gtagaaagtgatcaaacaaaagtagtgtatgatgcgaagaaaacaatagttgcaatgaac
cgcattggtttggcaatttctggtatcacatttgatatcatgttagcatcttacttgtta
aatccatctgattcaattgatgattttacaagtgttgcagtaagacatgattacacagaa
gtagaaacagatgaagcagtctacggaaaaggtgctaaacgtagcactcctgaagaaagc
attgttgcggcacacttagctaggaaagcagtggccattgctgacttagagaaaagacta
gttgatgatttagagaaaaatgaacaactagctttgatggaagacctagagctaccacta
acatttgttttagcagaaatggagatgcaaggagtcagcgtagatacagatcggcttgaa
gatatgaaagtagagctgggtggaagactaaaaacattagaagcatccattcattcacta
gctggcgaagaattcaatattaattcaccgaaacaactaggtgtaattttatttgaaaag
ctggaacttcccccagtcaagaaaacaaaaacaggctattcaacagctgcggatgtactg
gaaagtttgtctggaaaacacgcgattattgatgaaattttgttatatcgtcaacttggt
aaaattcagtccacttatatcgaagggctgcttaaagtgacggataaagaaacacataag
gtccatacacgtttcaaccaaacattaacgcaaacgggacgtttaagttcagtcgatccg
aacttacaaaatatcccgattcgtttagaagaaggtcggaaaatcagacaagtttttgtg
ccgagtaaacctggttggaaaatgttttcagccgattattctcaagtagagttgcgagtt
ttagcacatatttctgaagatgagaatttaatttatgcatttaagcacgattacgatatc
catacgaaaacagccatggacgtgtttcatgtggagaaggaagaagtggattcactaatg
cgccgtcaagctaaagcagtaaactttggtattgtatatggtattagtgattatgggctt
tcgcaaaaccttggtattacgcgtaaagaagcaaaagactttattgatcgttactttgtg
agttatccagccgtgaaagaatatatgcaagacattgtccgttttgcgaaagaaaaaggc
tatgtagagaccattttacatcgtcgtcgttatattccggagattgttagtcgtaatttt
aatgttcgcggatttgcagaaagaactgcgatgaacacacctattcaaggtagtgccgct
gatattatcaaaaaagcgatgattctgatgagcgagcgtttagtatctgaaaaattagaa
gcaaaattattacttcaagtgcacgatgaattaatcttcgaagcacctgaagctgaaata
gctaaattagaagaaattgtcccagatgttatggaaaatgcagtagagctttctgtgccg
ctaaaagtagatagcgcctttggtgacacttggtacgacgcgaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (22)   

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