KEGG   Listeria monocytogenes 08-5923 (serotype 1/2a): LM5923_1575
Entry
LM5923_1575       CDS       T01164                                 
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
  KO
K02340  DNA polymerase III subunit delta [EC:2.7.7.7]
Organism
lmy  Listeria monocytogenes 08-5923 (serotype 1/2a)
Pathway
lmy03030  DNA replication
lmy03430  Mismatch repair
lmy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lmy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LM5923_1575 (holA)
   03430 Mismatch repair
    LM5923_1575 (holA)
   03440 Homologous recombination
    LM5923_1575 (holA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lmy03032]
    LM5923_1575 (holA)
   03400 DNA repair and recombination proteins [BR:lmy03400]
    LM5923_1575 (holA)
Enzymes [BR:lmy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LM5923_1575 (holA)
DNA replication proteins [BR:lmy03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LM5923_1575 (holA)
DNA repair and recombination proteins [BR:lmy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LM5923_1575 (holA)
SSDB
Motif
Pfam: DNA_pol3_delta DNA_pol3_delta_C HTH_37 DUF1002 HTH_Crp_2 AAA_assoc_2 DNA_pol3_delt_C
Other DBs
NCBI-ProteinID: ADB71416
Position
complement(1549952..1550983)
AA seq 343 aa
MLPEWKRIRSKKITPVYLIIGTEDYIINETKQLLIDNILEGEEVEFNYANLDLEEMPIEM
VIQEAESMPFFGDKRLVMANNPLFLTTEKSKNKVDHDTAKLEAYLNEPVDYSVLCFVARV
EKLDERKKLTKLLKKTATVIEAKRPNENELKKWIEAKLSENNMQMSQEAITRLIELTSGQ
LTTAMNELQKLMLYCFDTKEITIQDVESLVVRSLEQNIFLLLDKMIAMDISGALRIYYDL
LKQKEEPIKILALISSQFRLLNQLKLLEQQGYSQQQAATKLKVHPFRVKLASKQAKNFTE
LQLNQALKRLAEIDLEMKTGFGDKEQKLEWFLFELQDNRQKRV
NT seq 1032 nt   +upstreamnt  +downstreamnt
atgctgccagaatggaaacggatacgctccaaaaaaataactccggtgtatttaatcatt
ggtacagaagattatattattaatgaaacgaaacaacttttaatagataatattttggaa
ggcgaagaagtagaatttaactatgctaatttagatttagaagaaatgccaatagaaatg
gtcattcaagaagcagaaagcatgccttttttcggtgataaacgtttagtaatggccaat
aatccactttttttaacaacggaaaaaagtaaaaacaaagtggatcatgatactgcaaaa
ttagaggcttatctcaatgaaccagttgattattcagtattatgctttgtagcacgcgta
gaaaagttagatgagcgtaaaaagcttactaagttactcaagaaaacagctactgttata
gaagcaaaacgacctaatgagaatgagttaaaaaaatggattgaagcaaaattaagcgag
aacaacatgcaaatgtcacaagaggctattactcgactgatagaattaactagtggtcag
ttaactacggccatgaatgaactgcaaaaattaatgctctattgttttgatacaaaagaa
attaccattcaggatgtagaatctttagttgtacgttcacttgagcaaaatatcttctta
ttacttgataagatgattgcaatggatatcagcggggcacttcggatttattatgatttg
ttaaaacaaaaggaagagcctatcaaaatactggcattaatttctagtcagttcagattg
ttgaaccaattaaaattattagaacaacaaggatattcccagcaacaagccgcaactaaa
ctaaaagtgcatccatttcgcgttaagttagcatcaaaacaagcgaagaatttcacggaa
ttacaattaaatcaagctttaaaacgattagctgaaatagacttggaaatgaaaactggc
tttggcgataaagagcagaaactcgaatggttcttattcgaattacaggataatcggcag
aaaagagtataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

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