KEGG   Listeria monocytogenes serotype 7 SLCC2482: LMOSLCC2482_0908
Entry
LMOSLCC2482_0908  CDS       T02221                                 
Name
(GenBank) ATP-dependent RNA helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
lmz  Listeria monocytogenes serotype 7 SLCC2482
Pathway
lmz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lmz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LMOSLCC2482_0908
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lmz03019]
    LMOSLCC2482_0908
   03009 Ribosome biogenesis [BR:lmz03009]
    LMOSLCC2482_0908
Enzymes [BR:lmz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     LMOSLCC2482_0908
Messenger RNA biogenesis [BR:lmz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     LMOSLCC2482_0908
Ribosome biogenesis [BR:lmz03009]
 Prokaryotic type
  rRNA helicases
   LMOSLCC2482_0908
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Helicase_RecD CMS1 AAA_19 NABP
Other DBs
NCBI-ProteinID: CBY03429
Position
940976..942535
AA seq 519 aa
MTLTKFSEFGLDEKIVKSVNRMGFEEATPIQEKTIPLGLAGKDLIGQAQTGTGKTAAFGL
PMIHKIDQKSNNVQALIIAPTRELAIQVSEELYKLSYDKHVRVLAVYGGSDISRQIRSLK
KNPQIVVGTPGRILDHINRRTLKLDHVETLVLDEADEMLNMGFIDDIETILKEVPAERQT
LLFSATMPDPIRRIGERFMHSPELIRIKAKEMTALLIEQFFVKVHEKEKFDVLSRLLDVQ
APELAIVFGRTKRRVDELSRALDMRGYVAEGIHGDLTQAKRMSVLRKFKEGKIDVLVATD
VAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKEGMAITFVQPREMGYLRIVEET
TKKRMQPLQAPTWDEAFAGQLRVATEKIQEAITEENLADYKTFANELLEKYDATDIAAAM
LKMLAKEPDKTPVHITEERPLPSRGGGGYKGKNGKGGKGGGYRGGSGKGGSYRDRNNSGK
GRRSGGGSGSGGGGNRDRRSGGGEQRSGGNKGNYSQKSK
NT seq 1560 nt   +upstreamnt  +downstreamnt
atgacattgacaaaattttcggagttcggactggacgaaaaaattgtaaaatcagtaaat
cggatggggtttgaagaagcaacaccaatccaagaaaagacaattccactaggactagca
ggtaaagacttaatcgggcaagcacaaacaggtactggtaaaacagccgcttttggtctt
ccaatgattcacaaaattgaccaaaagagtaacaacgtacaagctttaattattgctcca
acacgtgaacttgcaatccaagtttctgaagagctttataaacttagctatgacaaacat
gtacgtgtgctagcggtttacggtggtagcgatatcagccgtcaaatccgttcacttaag
aaaaacccacaaatcgtagttggtacgccaggacgtattttggatcatattaaccgtcgc
acactgaaactagaccacgtggaaacacttgtactagatgaagcagacgaaatgctaaac
atgggcttcattgatgatatcgaaactattctaaaagaagtaccagcagaacgtcaaact
ttactattttctgcaacaatgcctgatccaattcgccgtatcggtgaacgtttcatgcat
agcccagaacttattcgcattaaagcgaaagaaatgactgcactattaattgaacaattc
ttcgtaaaagtgcatgaaaaagaaaaatttgacgtattatctcgtttattagacgttcaa
gcaccggaactagctattgttttcggtcgtacgaaacgtcgtgtagacgaactatctcgc
gcgcttgatatgcgtggttacgtggctgaaggtatccacggtgacttgacgcaagcaaaa
cgtatgagtgtactacgcaaatttaaagaaggaaaaattgatgttctagttgcaacagac
gtagcagctcgtggacttgatatttccggcgtaacacatgtatataactatgatattcca
caagatccagaaagctatgttcaccgtatcggtcgtactggtcgtgctggtaaagaaggt
atggcgattactttcgtacaacctcgtgaaatgggttatttacgtattgtggaagaaact
acgaaaaaacgtatgcaaccacttcaagctcctacttgggacgaagcatttgcaggccaa
ttacgcgtagcaactgaaaaaattcaagaagcaatcacagaagaaaacttagctgactac
aaaacgtttgctaacgaacttcttgaaaaatacgatgcaactgacatcgcagcagcaatg
cttaaaatgttagcgaaagagccagacaaaactcctgtccatattactgaagagcgtcca
ttaccatcccgtggtggcggtggctacaaaggtaaaaatggtaaaggcggcaaaggtggc
ggctatcgcggcggaagcggcaaaggcggaagctaccgcgatcgtaacaacagcggcaaa
ggtcgtcgtagcggcggcggaagcggttctggcggtggtggcaatcgtgatcgtcgtagt
ggcggcggagaacaacgcagcggcggcaacaaaggcaactactcacaaaaatctaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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