KEGG   Loa loa (eye worm): LOAG_06523
Entry
LOAG_06523        CDS       T02664                                 
Name
(RefSeq) pre-mRNA splicing factor ATP-dependent RNA helicase
  KO
K12813  pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:5.6.2.6]
Organism
loa  Loa loa (eye worm)
Pathway
loa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:loa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    LOAG_06523
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:loa03041]
    LOAG_06523
Enzymes [BR:loa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     LOAG_06523
Spliceosome [BR:loa03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    LOAG_06523
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    LOAG_06523
SSDB
Motif
Pfam: OB_NTP_bind HA2_N Helicase_C DEAD HA2_C AAA_22 AAA_19 T2SSE Reprolysin Flavi_DEAD AAA_30 nSTAND3
Other DBs
NCBI-GeneID: 9943936
NCBI-ProteinID: XP_020302577
AA seq 1005 aa
MATLLEQWVNDELYKVVGCSDRTAVQYILALTRKSTDAEDLLERLRSTDTMDDTPAVRKF
VNELIARVPHAVAKVEKVIQPSAAELRAKEIMRLNRGLKIIESDDEDVPSRKRKESKEAK
SKLSVKESASDEMDRINAEEEQDLRERDELAARIRQRDREKTRNIVTKSEKKAEEEAAKR
LKLETKDRGKIVSQLREESRKQYLSKRKDDKLDELEKIVEDDEHFFANERLTEREKSDMK
YRKDILEYARQHERAADFLKIKRYHVPDAKVKSIPMDSLEDSDEIPKGDGKRWEDDRLAA
AIAKYGAKDKKRDEFEMVLDDEKIDFIQAFQMPGTSDTEEKTFSAAQKKKITLAEIRKSL
PVYAYRDEFIQAVHDHQVLIIEGETGSGKTTQLPQYLYEAGFCANKMKVGCTQPRRVAAM
SVATRVAEEMGVKLGIEVGYSIRFEDCTSERTVIKYMTDGMLLREFLNEPDLASYSVIII
DEAHERTLHTDVLFGLVKDIARFRKDLKLLISSATLDVEKFSTFFDDAPILRIPGRRFPV
DIYYTKAPEADYLDAAMVSILQIHLTQPLPGDILVFLTGQDEIETLMESLLERTKYFGKK
IKELIVLPIYANLPSDLQAKIFEPTPPNARKVVLATNIAETSVTIDGICYVIDPGFSKQN
SFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLYTAWAYKNELEDQPIPEIQRT
NLGNVVLMLKSLGIHDLVHFDYLDPPPQETLVIALEQLYALGALNHRGELTKLGRRMAEF
PCDPCMSKMIIASEKYGCSEEIITIAGMLSCNAAVFYRPKALVIHADTARKGFWVPGGDH
LTLLNVYNRWRDTNYSSQWCMENFVQYRTMKKARDVRDQLEGLLERVEIDQVSNNDSVAI
RKTITAGYFYNCAKLDSSGHYKTVKHKHTVHIHPNSSLFEETPRWMIYFELVFTSKEFMR
EVIEIESSWLTEVAPHYYRAKELEDLTNRKMPKQKGKAAIELSSL
NT seq 3018 nt   +upstreamnt  +downstreamnt
atggcaactttgttggagcaatgggtaaacgatgaattatacaaggtggtgggttgcagt
gaccgtactgctgtgcagtatatcttagcactgacacgaaaatcaacggatgctgaagat
ttgttagaacgattacgaagtacggatacaatggatgatacaccagctgtaaggaaattt
gttaatgagttgattgcacgcgtaccacatgcagttgccaaagtagaaaaagtaatacaa
ccatcagcagctgaattgcgcgcaaaggaaatcatgcgtctaaatcgaggtttaaagata
atagaatctgatgatgaagatgtaccatctaggaagcgcaaagaaagtaaggaagccaaa
agcaaactttcggtgaaagaaagcgcaagcgatgagatggatcggataaacgctgaggag
gagcaagatttgcgagagcgtgatgaactggcggcgagaataagacaacgagacagagaa
aaaactcgaaatatagttacaaagtcggaaaaaaaggctgaggaagaagctgcgaaaagg
ctaaagttggaaacaaaagatcgtggtaagattgtttcacaactgcgtgaagaaagccgg
aagcagtatttatcgaagaggaaggatgataagcttgatgaacttgaaaaaattgttgag
gatgatgaacactttttcgcgaatgagcgcttaacagaacgagagaaatcagatatgaaa
tatcgaaaagatatattagaatatgcacgacaacatgaacgtgcagcagattttctcaaa
attaagcgttatcatgtaccggatgctaaagtgaaatcaattccaatggatagtttggaa
gattcggatgaaattccaaagggtgatgggaaacgttgggaagatgatcgtttagcggca
gctatcgctaagtatggtgccaaagataagaaacgggacgaatttgaaatggtattggat
gatgagaaaattgatttcattcaagcttttcaaatgccaggaacatcggacactgaggaa
aagacgttttcggctgcccagaaaaagaaaattacgttagctgagatacggaagtcgctg
ccagtttatgcatatcgagatgagttcatacaagcagttcacgatcatcaggtgcttatc
atcgaaggtgaaacgggttctggaaaaaccacacaacttccgcagtatttgtatgaagcg
gggttctgtgccaacaaaatgaaagttggctgtactcaacctcgtcgggtggcagcgatg
agtgtagctacccgagtagctgaagagatgggtgtgaagttgggaattgaggttggttat
tcaatacgtttcgaagactgcacatcagaaaggacagttatcaagtatatgactgatggt
atgctgctacgggaatttttaaatgaacctgatctagccagttacagtgttattatcatc
gatgaagcccacgaacgaacgcttcatacggatgttttatttggtttagtgaaggatata
gcacggtttcgtaaagatcttaaacttctgatttcttctgcaacccttgatgttgaaaaa
ttctctacattttttgatgacgctccgatactcaggatacctggcaggcgctttccagtg
gatatttattacacaaaagctcctgaagctgattatcttgatgcagcaatggtctcgatt
ttgcagattcacttaacacaaccacttcctggtgatattcttgttttcttgactggacaa
gacgaaattgagacattaatggaatctttattagagagaacaaagtatttcggaaagaaa
attaaagagcttattgttttgcccatttatgcgaatctgccatccgatttgcaagccaaa
attttcgaaccaactccaccaaatgctcggaaggtggttttggccacaaatatagccgag
acctcggtgactattgatgggatctgttacgtgatcgatcctggattcagtaagcagaat
tcttttgatgctagaagtggcgtcgagcatttgcatgttgtcaccatttcaaaggccgct
gctaatcagcgtgctggaagagctggtcgaactggtcccggaaagtgtttccgtttatat
acagcttgggcttataaaaatgaattggaagatcagcctattccggaaatccaaaggaca
aatttgggcaatgttgtactgatgttgaaaagcttaggcatccacgatttagttcatttt
gactatttggatccacctccgcaggagacactggtaattgcgctagaacaattgtatgcg
cttggtgctttgaatcatcgcggtgaattaaccaaattgggaagacgtatggctgaattt
ccgtgtgatccgtgcatgagtaaaatgattatcgcatccgaaaaatatggatgttctgaa
gaaatcatcactattgctggaatgttatcatgtaatgcagcagtgttttatcggcctaaa
gctttggttatccacgcagatactgctcgaaaaggcttttgggtaccaggcggtgatcat
cttactttactcaatgtttacaatcgttggcgagataccaactactcgtcgcagtggtgt
atggagaattttgttcaatacaggacgatgaaaaaagctcgggatgttcgtgatcagctt
gaaggtttattggaaagagttgaaatagaccaggtttcgaataacgattcggtagcaatt
cgaaaaacaatcaccgcaggatatttctacaattgtgccaaactcgatagcagcgggcat
tacaaaactgttaagcataaacatacggtgcatattcatccaaattcctctttattcgaa
gaaactccacgatggatgatttatttcgagcttgttttcacatctaaagagttcatgcgt
gaggtcatcgagatcgaaagcagttggttaacggaagtcgcaccgcactattacagagct
aaagaattggaagatttaactaatcgaaaaatgccaaaacagaaaggaaaagcagcgatt
gaattgtcatcattgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (24)   

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