KEGG   Lepisosteus oculatus (spotted gar): 102687040
Entry
102687040         CDS       T07349                                 
Symbol
rbfox1
Name
(RefSeq) RNA binding protein fox-1 homolog 1 isoform X30
  KO
K14946  RNA binding protein fox-1
Organism
loc  Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:loc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:loc03041]
    102687040 (rbfox1)
Spliceosome [BR:loc03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    102687040 (rbfox1)
SSDB
Motif
Pfam: Fox-1_C RRM_1 RRM_5 SPESP1
Other DBs
NCBI-GeneID: 102687040
NCBI-ProteinID: XP_006637226
Ensembl: ENSLOCG00000006675
Position
LG13:complement(12525231..13167437)
AA seq 391 aa
MLSSQGVLLHPYGVSMILPAAPYFAGVVQGNQDATAPPETMAQPYASAQFAPPQNGIPAE
YTAPHPHPAPDYTGQTTVPEHTLNMYPPAQTHSEQTGPDTSAQTVSGTATQTDDAAQTDG
QQQTQSSDNTENKTQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGF
VTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYANGWKLNPVVGAVYS
PEFYAVPGFPYPAATAAAAYRGAHLRGRGRTVYNTFRAAAPPPPIPAYGGVVIQEPVYGN
KLPQGGYAAYRYAQPATATAAAYSDSYGRVYAADPYHHALTPAATYSVGAVNAFAPLTDA
KTRSHADDVGLVLSSLQASIYRGGYSRFAPY
NT seq 1176 nt   +upstreamnt  +downstreamnt
atgctgtcatctcaaggagtccttcttcatccctacggagtttccatgattttaccggcc
gcgccgtacttcgctggagttgttcagggtaatcaggacgccacagcacctcctgaaacg
atggcacagccttatgcttcagcccagtttgcgcccccgcagaatggcatccctgctgag
tacacagcccctcacccccaccctgcgcccgactacacaggccagaccacagtccccgag
cacacactaaacatgtaccccccagcgcagacgcacagtgaacagaccggccccgacaca
agcgcacagactgtctctggcactgccacacagacagacgatgcagcacagaccgacggc
cagcaacagacgcagtcctccgacaacacagaaaacaaaacacagcccaagaggctccac
gtctcaaatatccccttcagattccgggatccggatctcaggcaaatgtttggccaattt
ggtaaaatcttagatgttgaaataatttttaatgagcggggatctaagggatttggtttc
gtaacattcgaaaatagtgccgatgcggacagggcgcgagagaaattacacggcacggtg
gtagagggccgtaaaatcgaggttaataatgcaacagcacgggtaatgacaaataaaaag
acagtcaacccttatgcaaatggctggaagttgaatccagtggtgggtgccgtctacagc
ccagaattctatgcagtgccaggcttcccatatcctgctgcaactgcagcggctgcctac
agaggggcccacttaagagggcgggggcgcacggtctacaacacgttccgggcagctgcc
cctccaccccccatcccagcctacggaggagtagttattcaagagcctgtgtatggcaat
aagttaccacagggtggttacgctgcctacaggtacgcccagccagccaccgcgactgca
gctgcctatagtgacagttacggacgagtttatgctgcagacccctaccaccacgcactt
actccagcagccacatacagcgttggtgccgtgaatgcttttgcacccttgactgatgcc
aagactaggagccatgctgatgatgtcggtctcgttctttcttcattgcaggctagtata
taccgagggggatacagccgttttgctccatactaa

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (33)   
   RefSeq(pep) (33)   
DNA sequence (33)   
   RefSeq(nuc) (33)   
Protein domain (4)   
   Pfam (4)   
All databases (77)   

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