KEGG   Legionella oakridgensis: Loa_00827
Entry
Loa_00827         CDS       T03928                                 
Name
(GenBank) excinuclease ABC, C subunit
  KO
K03703  excinuclease ABC subunit C
Organism
lok  Legionella oakridgensis
Pathway
lok03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lok00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Loa_00827
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lok03400]
    Loa_00827
DNA repair and recombination proteins [BR:lok03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Loa_00827
SSDB
Motif
Pfam: UvrC_RNaseH_dom GIY-YIG UVR HHH_5 HHH_2
Other DBs
NCBI-ProteinID: AHE66395
UniProt: W0B972
Position
749661..751502
AA seq 613 aa
MLDNLSTFLANLTTEPGVYRMLDAKGNVLYIGKAANIKKRVSSYFTKTDAGAKTRSLVNQ
IAAIEVSITRSETEALLLESSLIKSLRPKYNVLLRDDKSYPFIHVTNQHAYPRMEVMRYK
HKPKKGDFFGPYPSVTAVREMLSTIQKVFKIRNCSDSDFSSRTRPCLQYQIKRCSAPCTA
YISEREYQQSVVDATRFLQGKSQDILTELEIRMEEAVKRLEFEEAARLRDQIKSLRLTQE
QQGMVQLQGDADVIVIEARPGFACIQWVTVRDGQVMGNQSFFPSVPAEALEEDDGEASVW
QQVFAAFIGYFYVDSPERIPPLILTNHPIEDQQALQATLSSLRGKTCRIQTKPRGIKARW
LDFASNNLEKVVAEYLTSTTIIAKRYEALQTLLKLHEKIMRMECFDVSHTQGDSTVASCV
VFDAHGPSKKEYRRFNITGITPGDDYKALEQAIRRRFKKLAAEQRLPTILIVDGGKGQVA
AAARVFDELNVKSVKLLGIAKGPTRKAGQEQIILADEAQEIILPPDSPALHLIQYIRDEA
HRFAITLHRKKRQKASFTSSLESIAGVGGKRRQALLRRFGGLRELAKAPVNEIAKVQGIS
ESLAARIYEHFHS
NT seq 1842 nt   +upstreamnt  +downstreamnt
atgttagataatctaagtacttttcttgccaacttaacgaccgagcctggcgtttatcgc
atgctggatgccaagggaaatgtgctatacatcggtaaagcggctaatataaaaaaacga
gtaagcagttattttaccaaaacggatgcaggcgcaaaaacacgttcgctggtcaatcag
atagcagcaatagaagttagtattactcgcagtgagacagaggccttgctccttgaaagc
agtttaattaaatcactgcgccctaaatacaatgttttgttacgcgacgataaatcgtac
ccgtttattcatgtcaccaatcaacacgcttatccccgcatggaagtgatgcgttataaa
cataagcctaaaaaaggggatttttttggcccatatcctagtgttaccgcagtaagagaa
atgttaagcactattcaaaaagtatttaagatccgtaattgcagcgacagtgactttagc
agtcgtacgcgaccttgtttgcagtatcaaattaaacgatgcagtgcaccttgtaccgca
tatatatcggaacgtgaatatcagcaatcggttgttgatgcgacacggtttttacaaggt
aaaagtcaggatattcttaccgaattagaaattcgtatggaggaggctgtcaagcgtctt
gaatttgaagaagctgcccgattgcgggaccaaatcaagagtttacgcttgacacaagaa
cagcaaggcatggtgcaattgcagggagatgcagatgttatagtgattgaggcgcgcccc
ggatttgcctgcattcaatgggtaactgtacgagatggtcaagtgatgggaaatcagagt
ttctttccttctgtaccagcggaggcgttagaggaggatgatggggaagcgagtgtgtgg
caacaagtttttgctgcctttattggctatttttatgtagattctccagaaagaattcca
ccgcttattttgacaaatcatccaatagaagatcagcaagcgcttcaggctacattgagc
tcattgcgtggtaaaacatgccgaattcaaacgaaaccgcgagggataaaagcccgttgg
ctggattttgcctctaataatttagaaaaggttgttgcggagtatttaacttccaccaca
ataatagcaaaacgctatgaagcattgcagactttattgaagttgcatgaaaaaatcatg
cgcatggaatgttttgatgttagtcatacacaaggggattccacggtggcatcttgcgtt
gtttttgatgctcatggcccatccaaaaaagagtatcgccgtttcaatatcaccggcatc
actcctggtgatgactataaagcgttggagcaagctattcgaagacgatttaaaaaactg
gcagcagaacaacgattgccaaccatcttgattgttgatgggggtaaaggacaagtggcg
gcggcagctcgtgttttcgatgaattaaatgtaaaaagcgttaaactgttaggaattgcc
aagggcccgacccgcaaagcgggtcaagaacaaattattcttgcagacgaagcacaggag
attattttaccgccagattctccggcattacatctaattcaatacattcgtgatgaagct
catcggttcgccattacgttgcaccgcaagaaaagacaaaaggcaagctttacctcatcg
cttgaatccattgcgggagtcggtggaaaacgccgccaggccttattgcggcgatttgga
ggattgcgggaattggcaaaagctcctgtgaatgaaatcgctaaggtgcaaggaatcagc
gagagtcttgcggcacgtatttatgagcattttcattcttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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