KEGG   Legionella pneumophila Paris (serogroup 1): lpp0004
Entry
lpp0004           CDS       T00209                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase, subunit B (type II topoisomerase)
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
lpp  Legionella pneumophila Paris (serogroup 1)
Brite
KEGG Orthology (KO) [BR:lpp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lpp03032]
    lpp0004 (gyrB)
   03400 DNA repair and recombination proteins [BR:lpp03400]
    lpp0004 (gyrB)
Enzymes [BR:lpp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     lpp0004 (gyrB)
DNA replication proteins [BR:lpp03032]
 Prokaryotic type
  DNA Topoisomerases
   lpp0004 (gyrB)
DNA repair and recombination proteins [BR:lpp03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      lpp0004 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB GyrB_insert DNA_gyraseB_C Toprim HATPase_c GyrB_hook HATPase_c_3 UFD1
Other DBs
NCBI-ProteinID: CAH11152
Pasteur: lpp0004
Position
4034..6451
AA seq 805 aa
MSVDASYDSNNIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDESLAGYCKE
IFVTIHSDESITVKDDGRGIPVDIHKEEGKSAAEVIMTVLHAGGKFDDNSYKVSGGLHGV
GVSVVNALSEELHLLVRRHGKVYEQHYRHGVPESPIAETGEANSTGTQIWFKPSAETFSN
IEFHYDILAKRLRELSYLNSGVCIHLFDERTQKKDTFHYEGGIKAFVEHLNKNKTPVHPV
VFSMTSEKDGIVIELAMQWNDGYQETIFCFTNNIPQRDGGTHMAGFRAALTRTLNNYIEN
EGYAKKAKVSPTGDDAREGLTAVLSVKVPDPKFSSQTKDKLVSSEVKPAVESCVAEKFND
FLLENPTASKSIVAKIIDAARAREAARRAREMTRRKGALDIAGLPGKLADCQEKDPSLSE
LYLVEGDSAGGSAKQARDRKFQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIG
PEEYDPDKVRYHRIIIMTDADVDGSHIRTLLLTFFYRQTRELLERGYIYIAQPPLYKVKR
GKQEQYVKDDEALFDYLTQCALDGATFYPAKEAPPISAKSLEELVQHFRRVEKIIKRYKR
RYPSDILKRVAYMPMLHQEDFNNLPKIENWCRQLHLSLQQVDSKTEQYKVDIQKLTEGNQ
YTPKITVYQHGLENDIPMQVEFFLSKDYKEMVDLGHKLSNLIEEGAYIQRGDKSLPVENF
EQVLNWLMDEAKKGQTIQRYKGLGEMNPEQLWETTMDPEVRRMLQVSIEDAVAADEIFTT
LMGDNVEPRRDFIETNALDAENIDI
NT seq 2418 nt   +upstreamnt  +downstreamnt
atgagcgtagacgccagttatgattcaaataatattaaagtcctaaaaggtttagacgca
gtaagaaaaagaccgggcatgtacattggggatacagatgatggaaccggtttgcatcat
atggtttttgaggttgtagataattcaatagatgaatccctggcaggttattgcaaggaa
attttcgttaccattcatagcgatgaatcaattaccgttaaggatgatggtcgtggtatt
cctgtcgatattcataaggaagaaggaaaatcagctgctgaagtcattatgacagtcctg
catgccggaggtaaatttgatgataactcttacaaggtatcaggcggtctacatggagta
ggggtatctgtggtgaatgccctttctgaagagttgcatttgctagtacgtagacatgga
aaagtgtatgagcaacattacaggcatggtgttcctgaatctcctattgctgaaactgga
gaagccaactctactggcacacaaatatggtttaaaccaagcgctgaaaccttttctaat
attgagttccattacgacattctagctaaaagattacgtgaattgtcatacctgaactca
ggtgtttgtattcacttatttgatgaaagaacacagaaaaaagacacgtttcactacgaa
ggcggtatcaaagcctttgttgagcacttaaataaaaataaaacaccagtccaccccgtt
gttttctcaatgacatcggaaaaagacggtatcgtcattgaactggcaatgcaatggaat
gatggctatcaagaaactatattttgctttactaacaacatcccacaaagggatggtgga
acacatatggctggctttagagcagcattaactcgcactttaaataattacatagaaaac
gaagggtatgctaaaaaggcaaaagtatctccaacaggtgatgatgctcgcgaaggatta
acagctgttctttcagtaaaagtccctgatcccaagttttcatcgcaaacgaaagataaa
ctggtttcatctgaagtaaaaccagcagtagaatcctgcgttgctgaaaaatttaacgat
tttcttttagaaaatcccactgcatcaaaatccatcgtagcaaaaattattgatgcagca
agagctagagaggcagcgcggcgtgctcgtgaaatgactcgacgtaaaggggctttggat
attgctggtttaccaggtaaattagctgattgccaagaaaaagacccatcgctttctgag
ttgtatttagttgagggtgactctgcaggaggctcagcaaaacaagcgcgagacagaaaa
ttccaggctattttacctcttaaaggcaagattcttaatgttgaaaaagcccggtttgac
aagatgctttcttctcaagaagtagccactttgattactgcattaggctgtggaattggt
cccgaggaatatgatccagataaagtacgttatcatagaatcatcattatgacagatgct
gatgtggatgggtctcacataagaactttacttcttacctttttctatagacaaaccaga
gagctattggaacgaggatatatttatattgcacaaccacctttgtataaagtaaagcgt
ggaaaacaggagcaatatgttaaagatgatgaagcgttatttgattatctaacgcagtgc
gcgttggatggggcgacattttatcccgccaaagaggctccgcccatatctgccaaatcg
ctggaagaattggttcaacatttcagacgagttgagaagattataaagcggtacaagaga
agataccccagcgatatactaaaaagagtagcttatatgccaatgctgcaccaagaggat
tttaacaatctgccaaaaattgaaaactggtgcagacaattacatctaagcttacaacaa
gtagacagtaaaacagaacaatacaaagtagatatccaaaaacttacagaaggtaatcaa
tacaccccaaaaattactgtgtaccagcatggcttggaaaatgatattccaatgcaagtt
gaatttttcttgtctaaagattacaaagaaatggttgatttaggacacaaattatcgaat
ttgatagaggaaggcgcctatattcaacgtggagataaatccttgcctgtggaaaacttt
gagcaagtacttaattggctaatggatgaagcaaaaaaaggacaaacaattcagcgctat
aaaggtcttggggaaatgaatcccgagcagttatgggaaacgaccatggatcctgaggtt
agacgaatgttgcaagtgagtatcgaagatgctgtagctgcagatgaaatctttaccacc
ttaatgggcgacaatgtagaaccaagaagagatttcattgaaacgaatgccttagatgct
gaaaacattgatatataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   PASTEUR (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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