KEGG   Lactiplantibacillus plantarum subsp. plantarum P-8: LBP_cg1696
Entry
LBP_cg1696        CDS       T02670                                 
Name
(GenBank) Single-strand DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lpr  Lactiplantibacillus plantarum subsp. plantarum P-8
Pathway
lpr03410  Base excision repair
lpr03430  Mismatch repair
lpr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lpr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    LBP_cg1696
   03430 Mismatch repair
    LBP_cg1696
   03440 Homologous recombination
    LBP_cg1696
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lpr03400]
    LBP_cg1696
DNA repair and recombination proteins [BR:lpr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     LBP_cg1696
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     LBP_cg1696
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      LBP_cg1696
SSDB
Motif
Pfam: ssDNA-exonuc_C RecJ_OB DHH DHHA1
Other DBs
NCBI-ProteinID: AGL64442
Position
complement(1741291..1743627)
AA seq 778 aa
MLAAKKKWVPRLTTAVDEADVDKLAEAASVTPLVARLLIMRGINTAEEAAPFLHADQQPL
LDPTTMHDMEKAVDRIQEAIIAGDQITIYGDYDADGLTSTSIMYETLDQIGANVNYYIPD
RFKDGYGPNQAAFDRLIAAGTKLFVTVDNGVAGNAVINQVQEQGIDVVVTDHHELPTELP
HAYAIVHPRHPEGSYPFGGLSGAGVAFKVATALLEEVPEELLDLAAIGTVADLVSLTGEN
RTLVTLGLKVLQQTTRPGLAALIQEAGLIPDKLTETNIGFGIAPRLNALGRLQSAQSGVE
LLTTLDDERATALAKQVNQLNEKRQGLVKTISASAIEQAQTPENEARQTLVITGHGWHEG
VLGIVASHVVETTGKPTLVLNEDDDGRLKGSGRSVEAYNLFAAIDPVRESLVAFGGHHMA
VGLTVMADQLATLKEAMEAAAVSQQLADNAQVSLPIDGTLPLAEATLATLADIQALAPFG
TDNPAPLFELVPTTVPQARAIGSDQQHLKLQLGDGTNTIDAIGFSMGTALPAIQASPTDV
TLVGELSENTWNGQTKPQIMVKDIAVTGTQVIDARTQHLSAHLFQAPGVYLFFHQRLLKK
VEQYLGSQAQAVWVGDTKTDLTAVTANQAVFIVDCPDTLADMTQVLSTIALDQLTLYLYR
QESVYLTGMPNRAQFAKLFQFTAAHHDVDIHHQLTLVAKHLHIERNLLIFMIQVFFEVGF
VKINDGVMNGVSNPAKADLHHAPSYQLREQQIVAEETLLYSKSAALQVWVKNQAAVKN
NT seq 2337 nt   +upstreamnt  +downstreamnt
atgttagcggcaaagaaaaagtgggtgccacgtttaacaacggccgttgatgaagccgat
gttgataagttagctgaggcggccagcgtgacccccttagttgcccggttattaataatg
cggggcattaatacggcggaagaagccgccccattcctgcacgcggatcaacaaccattg
ttggacccaacgaccatgcacgatatggaaaaagccgttgaccgcatccaagaggcgatt
attgccggggatcaaattaccatttacggtgattatgatgcagatggtttaacaagtacg
tcaattatgtatgaaacgttggaccaaattggcgctaacgtgaattactatattccagat
cgtttcaaggatggttatggtcctaatcaggccgcttttgaccggctgattgcggctgga
acgaagctgtttgtgacggtggacaacggtgtcgcgggaaatgcggtcatcaatcaagtg
caggaacagggcatcgatgtcgtagtgaccgatcatcatgagttaccgactgaattgccg
cacgcttacgccattgtccatccacgacatccagagggcagttatccatttggtggtctt
tctggtgccggtgtggcgtttaaagtagcgacggcgctacttgaggaagtacccgaggaa
ctattagatctggctgctattggaacggttgctgatttggtcagcttaactggtgaaaat
cggactttggtaacgctcggcctgaaggtcttacagcagacgacccgcccaggcttggca
gcactgattcaagaagccggactgattcccgataaattgaccgagaccaatatcgggttt
ggtattgcccctcggctaaacgcacttggccgtctgcagtcggcgcagagcggtgtagaa
ttattgacaactttggacgatgagcgggcgaccgcgctggccaagcaggtcaatcaattg
aatgaaaaacgccaaggcttggtcaagacaatcagtgccagtgcaatcgagcaagcacag
acgccggaaaatgaggcccgccaaaccttagttattaccgggcatggttggcacgagggt
gttttgggaatcgtcgcgagccacgtggtcgaaacgactggcaaaccaaccctagtgtta
aatgaggatgatgatggccggctcaaaggtagtggtcggagcgtcgaagcgtataattta
tttgccgcaatcgacccagttcgggagtcattggtggcttttggcggtcatcatatggcg
gttggactaactgtcatggccgaccagttagcaacgcttaaagaggcgatggaagcggcg
gcggttagtcagcaattagcagataatgcgcaagtcagtttaccaattgacggcacgtta
ccattagctgaggcaaccttggcaactctggcagatattcaagcgttggccccctttgga
acggataacccggcaccgttgtttgaattagttccaacgactgttccgcaagcacgcgcg
atcggtagtgatcagcaacacttgaaattacaactgggtgatggcaccaatacgattgat
gctatcggtttttcgatgggtactgccttgccggctattcaggcgagtcccaccgatgtg
acgttagtgggtgagttgagtgaaaatacttggaacggtcagacgaagccccaaatcatg
gttaaggatattgcagtgacggggacccaggtgatcgacgcccggacgcaacatctttcg
gcccatttgtttcaagcaccgggggtttacctctttttccaccagcgtctgttgaaaaaa
gttgaacagtatttaggttcccaagcgcaagccgtatgggtgggggatacgaaaacggat
ctgactgccgtgacggctaatcaagcggtcttcattgtcgattgtcctgacacgctggcg
gatatgacccaggtactcagcacaattgcgctcgatcagctgacgctctacttatatcgg
caagaatcggtttatttaacgggaatgccaaatcgcgcgcagtttgcgaaacttttccag
tttaccgcagcgcaccatgatgttgatattcatcatcaattaacattagtggccaagcat
ctgcatattgaacgaaatttgcttattttcatgattcaggtgttttttgaggtcggattt
gttaaaataaatgatggtgtcatgaatggcgtttcgaatccggcaaaagcggatttacat
cacgcccctagttatcagctgcgcgaacaacaaatcgttgctgaagaaacgcttttatat
agtaaatctgcagcgctccaagtatgggtgaagaaccaggctgcggttaagaattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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