KEGG T02670: LBP

Lactiplantibacillus plantarum subsp. plantarum P-8: LBP_cg1729

Entry

LBP_cg1729        CDS       T02670

Name

(GenBank) Metallo-beta-lactamase superfamily protein (Putative)

K12574

ribonuclease J [EC:3.1.-.-]

Organism

lpr Lactiplantibacillus plantarum subsp. plantarum P-8

Pathway

lpr03018

RNA degradation

Brite

KEGG Orthology (KO) [BR:lpr00001]
09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LBP_cg1729
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lpr03019]
    LBP_cg1729
Messenger RNA biogenesis [BR:lpr03019]
Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     LBP_cg1729

SSDB

Motif

Pfam:

RNase_J_C Lactamase_B RMMBL Lactamase_B_2

Other DBs

NCBI-ProteinID:

AGL64475

Position

complement(1775358..1777082)

AA seq 574 aa
MSSEIQITPFGGVRENGKNMYAVEVDGDIYILDCGLKYPENELLGIDIVIPDFSYLRENA
DRIVGVFLTHGHADAIGALPYFLNEFNVPVFGSELTIELAKIQLQKDPKAKNFNDFHIIN
EKTEIDFGTVTVSFFRTTHSIPDSMGIVLQTSAGEVVYTGDFKFDPTAAGDYQTDFARLA
EIGSKGVLALLSDSANAENYEQPVSEREIAAYVLETFKYHPGRIIVASVASNILRIQQVL
DAAAKSNRKVALMPGDVESIVKTAIDLGKLHMPEDVVVPLKAIDKLKPEQIVILQTGRMG
EPIKALQRMANKQESKVNIEKGDLVFITTTPSHSMETVVAKTRDMIYRADADVKAIADEM
NSSGHAAKRDLQMMINMMKPQYFIPIQGEYRLLDAHADFAREVGIPDDHVLIAAKGDQLR
YDGDTMHLAGSIEVGDTMIDGIGVGDIGNIVLRDRKILSEDGIFVAVVTIDRKKKKIIAT
PKITSRGFVYVKTSKDLMQESAELVKTTVQENLDNKEFDWGHLKQAVREKLNHYLWDQTK
RHPVILPVIMEVNQHHRRTKKAKPAKPVETESKA

NT seq 1725 nt +upstreamnt +downstreamnt
ttgagtagtgaaattcaaattaccccatttggtggggtccgtgagaacggcaaaaacatg
tatgctgtcgaagtcgatggtgatatttatattttagattgtgggttaaagtacccagaa
aatgagttattaggaattgatatcgtgattccggacttcagttatttgcgagaaaatgct
gatcgaatcgtcggtgtctttttgacccacggccacgctgatgccattggtgcgttaccg
tactttttgaatgagttcaacgttcccgtgtttggttcagagctaaccattgagttggca
aaaattcaattgcaaaaggaccctaaagctaaaaactttaatgacttccacatcattaat
gagaagacagaaattgattttggcacggtcacggtttcgtttttccgcacgacccattcg
attccagattcaatgggaatcgtgttgcaaaccagtgccggtgaggtcgtttataccggt
gactttaagtttgatccgacggccgcaggcgactatcagactgattttgcgcggttggcg
gagattggatcaaaaggcgtcttggcgttacttagtgattcagctaatgcagaaaattat
gaacagccggtcagtgaacgtgaaattgcggcctatgttttagaaacgtttaaatatcat
ccaggacggatcattgtcgcttcagttgcatccaatatcttgcgtattcagcaagtttta
gatgccgctgcaaagtctaatcggaaagtcgctttaatgcctggtgacgttgagagtatc
gtgaagaccgcaatcgatttaggaaagttacacatgcctgaagacgttgtcgtgccactt
aaagccattgataaacttaaacctgaacaaatcgtgattttacaaacgggccgaatgggc
gaacctattaaggccttacaacggatggctaataagcaggagagcaaggtcaatatcgaa
aagggtgatctggtatttattactaccacaccgtcacattcgatggaaaccgtggttgcc
aagacccgtgatatgatctatcgtgctgatgcggacgttaaggcgattgctgatgaaatg
aattcctccggccatgccgctaaacgtgacttgcaaatgatgatcaacatgatgaagccc
caatatttcattccgattcaaggggagtatcgtctgttggatgctcatgcggactttgca
cgtgaagttggaattccggacgaccatgtcctgatcgcagccaagggtgaccagttacgt
tatgacggtgataccatgcacttggccggttcaatcgaagtcggcgatacgatgatcgat
ggcatcggggtcggtgacattgggaacattgtgttacgtgaccgcaagattttgtctgaa
gacggtattttcgtggcagtggtcacgattgatcgcaaaaagaagaagattattgcgact
cctaagattacttcacggggcttcgtctacgtcaagactagtaaagacttgatgcaagag
agcgctgagttagtcaaaacgacggtgcaagaaaatctcgataataaagagtttgattgg
ggccatttaaaacaggctgtccgtgagaagttgaaccattatttatgggaccagaccaag
cggcacccagttattttaccggttattatggaagttaatcagcatcatcggcgtacaaag
aaggctaaaccagccaaaccagtcgagactgaatctaaagcttag

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (11)   

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