KEGG   Lactiplantibacillus plantarum ZJ316: zj316_1099
Entry
zj316_1099        CDS       T02458                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
lpt  Lactiplantibacillus plantarum ZJ316
Pathway
lpt03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:lpt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    zj316_1099 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lpt03021]
    zj316_1099 (rpoA)
   03400 DNA repair and recombination proteins [BR:lpt03400]
    zj316_1099 (rpoA)
Enzymes [BR:lpt01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     zj316_1099 (rpoA)
Transcription machinery [BR:lpt03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     zj316_1099 (rpoA)
DNA repair and recombination proteins [BR:lpt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      zj316_1099 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L HHH_5
Other DBs
NCBI-ProteinID: AGE38638
Position
1145933..1146877
AA seq 314 aa
MIEFEKPNIHKIDENDNYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSIQIDGVL
HEFSTIEGVTEDVTAIILNVKKIALKLESDETKTLEIDVKGPANVTAGDIIGDADVEVLN
PDLPICTVADGAHFHMRMTANTGRGYVSAEDNKHREDDMPIGVLAVDSLYSPIERVNYQV
ENTRVGQRDDFDKLTLDVWTNGSITPSEAISLSAKILTDHLSIFVNLTDEAKNTDVMVEK
EETHKEKMLEMTIEELDLSVRSYNCLKRAGINTVQELTNKTEADMMKVRNLGRKSLEEVK
AKLADLGLSLRKED
NT seq 945 nt   +upstreamnt  +downstreamnt
atgattgaatttgaaaaacctaacattcataaaattgatgaaaacgacaactatggtaag
tttgttgtagaaccgcttgaacgcggttatggtacaactttagggaattcacttcgtcgg
attcttctttcttctttacctggcgctgctgttactagtattcaaattgatggtgttctt
catgaattttcaacgattgagggcgtaacggaagacgttacagcaattatcttgaatgtt
aagaagattgcacttaagttggaatcagacgaaaccaagacgttggaaatcgacgttaag
ggtcctgctaacgttactgccggtgatatcattggcgatgcggacgtagaagtcttgaat
ccagacttaccaatttgtaccgtagcagacggggcacacttccatatgcgtatgaccgca
aatactggtcgtggttatgtttccgctgaggataacaaacatcgtgaagatgacatgcca
attggcgttttagctgttgattcattgtattctccaatcgaacgtgtcaactatcaagtt
gaaaacacgcgggttggtcaacgtgatgatttcgataagttaaccttagacgtttggaca
aatggttcaatcactccaagtgaagccattagtctatcagccaaaatcctgactgatcac
ctttcaatcttcgtaaatctcaccgatgaagctaaaaacactgacgtgatggtcgagaag
gaagaaacgcataaggaaaagatgttagaaatgacgattgaagagttagatctctccgtc
cgttcatacaattgcttgaagcgtgctggcatcaacacggtccaagaattaactaacaaa
actgaagctgatatgatgaaggttcgcaaccttggacgcaagtcactcgaggaagttaag
gcaaaattagctgaccttgggttatcattacgcaaagaagactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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